eF-site ID 6n4n-A
PDB Code 6n4n
Chain A

click to enlarge
Title Crystal structure of the designed protein DNCR2/danoprevir/NS3a complex
Classification DE NOVO PROTEIN/HYDROLASE/INHIBITOR
Compound NS3 protease
Source (6N4N)
Sequence A:  KKGSVVIVGRINLSGDTAYAQQTRGEEGCQETSQTGRDKN
QVEGEVQIVSTATQTFLATSINGVLWTVYHGAGTRTIASP
KGPVTQMYTNVDKDLVGWQAPQGSRSLTPCTCGSSDLYLV
TRHADVIPVRRRGDSRGSLLSPRPISYLKGSAGGPLLCPA
GHAVGIFRAAVSTRGVAKAVDFIPVESLETTMRSP
Description


Functional site

1) chain A
residue 1097
type
sequence C
description binding site for residue ZN A 1201
source : AC1

2) chain A
residue 1099
type
sequence C
description binding site for residue ZN A 1201
source : AC1

3) chain A
residue 1145
type
sequence C
description binding site for residue ZN A 1201
source : AC1

4) chain A
residue 1149
type
sequence H
description binding site for residue ZN A 1201
source : AC1

5) chain A
residue 1043
type
sequence F
description binding site for residue TSV A 1202
source : AC2

6) chain A
residue 1057
type
sequence H
description binding site for residue TSV A 1202
source : AC2

7) chain A
residue 1079
type
sequence D
description binding site for residue TSV A 1202
source : AC2

8) chain A
residue 1081
type
sequence D
description binding site for residue TSV A 1202
source : AC2

9) chain A
residue 1135
type
sequence L
description binding site for residue TSV A 1202
source : AC2

10) chain A
residue 1136
type
sequence K
description binding site for residue TSV A 1202
source : AC2

11) chain A
residue 1137
type
sequence G
description binding site for residue TSV A 1202
source : AC2

12) chain A
residue 1138
type
sequence S
description binding site for residue TSV A 1202
source : AC2

13) chain A
residue 1139
type
sequence A
description binding site for residue TSV A 1202
source : AC2

14) chain A
residue 1154
type
sequence F
description binding site for residue TSV A 1202
source : AC2

15) chain A
residue 1155
type
sequence R
description binding site for residue TSV A 1202
source : AC2

16) chain A
residue 1156
type
sequence A
description binding site for residue TSV A 1202
source : AC2

17) chain A
residue 1157
type
sequence A
description binding site for residue TSV A 1202
source : AC2

18) chain A
residue 1168
type
sequence D
description binding site for residue TSV A 1202
source : AC2

19) chain A
residue 989
type
sequence K
description binding site for residue SO4 A 1203
source : AC3

20) chain A
residue 990
type
sequence G
description binding site for residue SO4 A 1203
source : AC3

21) chain A
residue 1038
type
sequence T
description binding site for residue SO4 A 1203
source : AC3

22) chain A
residue 1039
type
sequence A
description binding site for residue SO4 A 1203
source : AC3

23) chain A
residue 1062
type
sequence R
description binding site for residue SO4 A 1203
source : AC3

24) chain A
residue 1080
type
sequence K
description binding site for residue SO4 A 1204
source : AC4

25) chain A
residue 1121
type
sequence D
description binding site for residue SO4 A 1204
source : AC4

26) chain A
residue 1155
type
sequence R
description binding site for residue SO4 A 1204
source : AC4

27) chain A
residue 1171
type
sequence P
description binding site for residue SO4 A 1204
source : AC4

28) chain A
residue 1174
type
sequence S
description binding site for residue SO4 A 1204
source : AC4

29) chain A
residue 1057
type ACT_SITE
sequence H
description Charge relay system; for serine protease NS3 activity => ECO:0000255|PROSITE-ProRule:PRU01166
source Swiss-Prot : SWS_FT_FI1

30) chain A
residue 1081
type ACT_SITE
sequence D
description Charge relay system; for serine protease NS3 activity => ECO:0000255|PROSITE-ProRule:PRU01166
source Swiss-Prot : SWS_FT_FI1

31) chain A
residue 1139
type ACT_SITE
sequence A
description Charge relay system; for serine protease NS3 activity => ECO:0000255|PROSITE-ProRule:PRU01166
source Swiss-Prot : SWS_FT_FI1

32) chain A
residue 1097
type BINDING
sequence C
description BINDING => ECO:0000255|PROSITE-ProRule:PRU01166
source Swiss-Prot : SWS_FT_FI2

33) chain A
residue 1099
type BINDING
sequence C
description BINDING => ECO:0000255|PROSITE-ProRule:PRU01166
source Swiss-Prot : SWS_FT_FI2

34) chain A
residue 1145
type BINDING
sequence C
description BINDING => ECO:0000255|PROSITE-ProRule:PRU01166
source Swiss-Prot : SWS_FT_FI2

35) chain A
residue 1149
type BINDING
sequence H
description BINDING => ECO:0000255|PROSITE-ProRule:PRU01166
source Swiss-Prot : SWS_FT_FI2


Display surface

Download
Links