eF-site ID 6mwq-B
PDB Code 6mwq
Chain B

click to enlarge
Title Single particle cryoEM structure of a DARPin-aldolase platform in complex with GFP
Classification LYASE/FLUORESCENT PROTEIN
Compound DARPin, Muscle-type aldolase chimeric fusion
Source (GFP_AEQVI)
Sequence B:  SGSDLGKKLLEAARAGQDDEVRILMANGADVNALDRFGLT
PLHLAAQRGHLEIVEVLLKCGADVNAADLWGQTPLHLAAT
AGHLEIVEVLLKYGADVNALDLIGKTPLHLTAIDGHLEIV
EVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN
LSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEEN
RRFYRQLLLTADDRVNPCIGGVILFHETLYQKADDGRPFP
QVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERC
AQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVLARYA
SICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYK
ALSDHHIYLEGTLLKPNMVTPGHACTQKYSHEEIAMATVT
ALRRTVPPAVTGVTFLSGGQSEEEASINLNAINKCPLLKP
WALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALAN
SLACQGKYTPSGQ
Description


Functional site

1) chain B
residue 202
type catalytic
sequence D
description 222
source MCSA : MCSA2

2) chain B
residue 315
type catalytic
sequence K
description 222
source MCSA : MCSA2

3) chain B
residue 356
type catalytic
sequence E
description 222
source MCSA : MCSA2

4) chain B
residue 358
type catalytic
sequence E
description 222
source MCSA : MCSA2

5) chain B
residue 398
type catalytic
sequence K
description 222
source MCSA : MCSA2

6) chain B
residue 469
type catalytic
sequence S
description 222
source MCSA : MCSA2

7) chain B
residue 279
type MOD_RES
sequence K
description N6-malonyllysine; alternate => ECO:0000250
source Swiss-Prot : SWS_FT_FI10

8) chain B
residue 300
type MOD_RES
sequence S
description Phosphoserine => ECO:0000250|UniProtKB:P05065
source Swiss-Prot : SWS_FT_FI11

9) chain B
residue 480
type MOD_RES
sequence K
description N6-malonyllysine => ECO:0000250
source Swiss-Prot : SWS_FT_FI12

10) chain B
residue 210
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate => ECO:0000250|UniProtKB:P04075
source Swiss-Prot : SWS_FT_FI13

11) chain B
residue 211
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:10504235, ECO:0007744|PDB:6ALD
source Swiss-Prot : SWS_FT_FI3

12) chain B
residue 440
type BINDING
sequence S
description BINDING => ECO:0000269|PubMed:10504235, ECO:0007744|PDB:6ALD
source Swiss-Prot : SWS_FT_FI3

13) chain B
residue 469
type BINDING
sequence S
description BINDING => ECO:0000269|PubMed:10504235, ECO:0007744|PDB:6ALD
source Swiss-Prot : SWS_FT_FI3

14) chain B
residue 472
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:10504235, ECO:0007744|PDB:6ALD
source Swiss-Prot : SWS_FT_FI3

15) chain B
residue 241
type SITE
sequence C
description Essential for substrate cleavage
source Swiss-Prot : SWS_FT_FI4

16) chain B
residue 276
type SITE
sequence K
description Essential for substrate cleavage
source Swiss-Prot : SWS_FT_FI4

17) chain B
residue 315
type SITE
sequence K
description Alkylation inactivates the enzyme
source Swiss-Prot : SWS_FT_FI5

18) chain B
residue 204
type MOD_RES
sequence S
description Phosphoserine => ECO:0000250|UniProtKB:P04075
source Swiss-Prot : SWS_FT_FI6

19) chain B
residue 207
type MOD_RES
sequence S
description Phosphoserine => ECO:0000250|UniProtKB:P04075
source Swiss-Prot : SWS_FT_FI6

20) chain B
residue 214
type MOD_RES
sequence S
description Phosphoserine => ECO:0000250|UniProtKB:P04075
source Swiss-Prot : SWS_FT_FI6

21) chain B
residue 440
type MOD_RES
sequence S
description Phosphoserine => ECO:0000250|UniProtKB:P04075
source Swiss-Prot : SWS_FT_FI6

22) chain B
residue 210
type MOD_RES
sequence K
description N6-acetyllysine; alternate => ECO:0000250|UniProtKB:P04075
source Swiss-Prot : SWS_FT_FI7

23) chain B
residue 267
type MOD_RES
sequence K
description N6-(2-hydroxyisobutyryl)lysine => ECO:0000250|UniProtKB:P04075
source Swiss-Prot : SWS_FT_FI8

24) chain B
residue 315
type MOD_RES
sequence K
description N6-(2-hydroxyisobutyryl)lysine => ECO:0000250|UniProtKB:P04075
source Swiss-Prot : SWS_FT_FI8

25) chain B
residue 276
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0000250|UniProtKB:P04075
source Swiss-Prot : SWS_FT_FI9

26) chain B
residue 498
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0000250|UniProtKB:P04075
source Swiss-Prot : SWS_FT_FI9


Display surface

Download
Links