eF-site ID 6mso-ABCD
PDB Code 6mso
Chain A, B, C, D

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Title Crystal structure of mitochondrial fumarate hydratase from Leishmania major in a complex with inhibitor thiomalate
Classification LYASE/LYASE inhibitor
Compound fumarate hydratase
Source (Q4QAU9_LEIMA)
Sequence A:  AEFNFVPLVSKVSHKETKYRLLTKDYVSVVQPGAGLPEML
RVDPAALTLLSSTAFDDVEHLLRSSHLMSLRKIFDDPEAS
DNDKFVALQLLKNANISSARLLPGCQDTGTAIIAGYRGDQ
VFVPGNDEEALSRGVYDIFQKRNFRYSQNVPLSMYDEKNT
GTNLPAQIDLYASKGMEYSFMFVAKGGGSANKSFLLQETK
SVLNPKSLRNFLKEKLAMFGTSACPPYHVAVVIGGTSAEM
TMKVLKYASCHYYDDLITKPDMKTGYTFRDLELEEEVLKV
CQNIGMGAQFGGKYYAHDVRVIRMPRHGASCPIGIGVSCS
ADRQALGKINKDGVWLEELEMEPSQYLPDLKEDELLKTPA
VMVNLNRPMPEVLQELSKHPVRTRLSLTGTIIVARDSAHA
RMREMLEAGKPLPQYMKEHPVYYAGPAKQPDGLPSGSFGP
TTAGRMDPFVDLFQSHGGSMVMLAKGNRSKQVTKACHKYG
GFYLGSIGGPAAVLAQNAIKKVECLDMKDLGMEAVWRIEV
ENFPAFIVVDDKGNDFFEQL
B:  AEFNFVPLVSKVSHKETKYRLLTKDYVSVVQPGAGLPEML
RVDPAALTLLSSTAFDDVEHLLRSSHLMSLRKIFDDPEAS
DNDKFVALQLLKNANISSARLLPGCQDTGTAIIAGYRGDQ
VFVPGNDEEALSRGVYDIFQKRNFRYSQNVPLSMYDEKNT
GTNLPAQIDLYASKGMEYSFMFVAKGGGSANKSFLLQETK
SVLNPKSLRNFLKEKLAMFGTSACPPYHVAVVIGGTSAEM
TMKVLKYASCHYYDDLITKPDMKTGYTFRDLELEEEVLKV
CQNIGMGAQFGGKYYAHDVRVIRMPRHGASCPIGIGVSCS
ADRQALGKINKDGVWLEELEMEPSQYLPDLKEDELLKTPA
VMVNLNRPMPEVLQELSKHPVRTRLSLTGTIIVARDSAHA
RMREMLEAGKPLPQYMKEHPVYYAGPAKQPDGLPSGSFGP
TTAGRMDPFVDLFQSHGGSMVMLAKGNRSKQVTKACHKYG
GFYLGSIGGPAAVLAQNAIKKVECLDMKDLGMEAVWRIEV
ENFPAFIVVDDKGNDFFEQL
C:  FNFVPLVSKVSHKETKYRLLTKDYVSVVQPGAGLPEMLRV
DPAALTLLSSTAFDDVEHLLRSSHLMSLRKIFDDPEASDN
DKFVALQLLKNANISSARLLPGCQDTGTAIIAGYRGDQVF
VPGNDEEALSRGVYDIFQKRNFRYSQNVPLSMYDEKNTGT
NLPAQIDLYASKGMEYSFMFVAKGGGSANKSFLLQETKSV
LNPKSLRNFLKEKLAMFGTSACPPYHVAVVIGGTSAEMTM
KVLKYASCHYYDDLITKPDMKTGYTFRDLELEEEVLKVCQ
NIGMGAQFGGKYYAHDVRVIRMPRHGASCPIGIGVSCSAD
RQALGKINKDGVWLEELEMEPSQYLPTPAVMVNLNRPMPE
VLQELSKHPVRTRLSLTGTIIVARDSAHARMREMLEAGKP
LPQYMKEHPVYYAGPAKQPDGLPSGSFGPTTAGRMDPFVD
LFQSHGGSMVMLAKGNRSKQVTKACHKYGGFYLGSIGGPA
AVLAQNAIKKVECLDMKDLGMEAVWRIEVENFPAFIVVDD
KGNDFFEQ
D:  FNFVPLVSKVSHKETKYRLLTKDYVSVVQPGAGLPEMLRV
DPAALTLLSSTAFDDVEHLLRSSHLMSLRKIFDDPEASDN
DKFVALQLLKNANISSARLLPGCQDTGTAIIAGYRGDQVF
VPGNDEEALSRGVYDIFQKRNFRYSQNVPLSMYDEKNTGT
NLPAQIDLYASKGMEYSFMFVAKGGGSANKSFLLQETKSV
LNPKSLRNFLKEKLAMFGTSACPPYHVAVVIGGTSAEMTM
KVLKYASCHYYDDLITKPDMKTGYTFRDLELEEEVLKVCQ
NIGMGAQFGGKYYAHDVRVIRMPRHGASCPIGIGVSCSAD
RQALGKINKDGVWLEELEMEPSQYLPDLKTPAVMVNLNRP
MPEVLQELSKHPVRTRLSLTGTIIVARDSAHARMREMLEA
GKPLPQYMKEHPVYYAGPAKQPDGLPSGSFGPTTAGRMDP
FVDLFQSHGGSMVMLAKGNRSKQVTKACHKYGGFYLGSIG
GPAAVLAQNAIKKVECLDMKDLGMEAVWRIEVENFPAFIV
VDDKGNDFFEQ
Description


Functional site

1) chain A
residue 114
type
sequence C
description binding site for residue SF4 A 601
source : AC1

2) chain A
residue 115
type
sequence Q
description binding site for residue SF4 A 601
source : AC1

3) chain A
residue 195
type
sequence G
description binding site for residue SF4 A 601
source : AC1

4) chain A
residue 233
type
sequence C
description binding site for residue SF4 A 601
source : AC1

5) chain A
residue 328
type
sequence C
description binding site for residue SF4 A 601
source : AC1

6) chain A
residue 330
type
sequence A
description binding site for residue SF4 A 601
source : AC1

7) chain A
residue 474
type
sequence K
description binding site for residue SF4 A 601
source : AC1

8) chain A
residue 23
type
sequence H
description binding site for residue GOL A 602
source : AC2

9) chain A
residue 28
type
sequence Y
description binding site for residue GOL A 602
source : AC2

10) chain A
residue 337
type
sequence K
description binding site for residue GOL A 602
source : AC2

11) chain A
residue 288
type
sequence K
description binding site for residue GOL A 603
source : AC3

12) chain A
residue 291
type
sequence Q
description binding site for residue GOL A 603
source : AC3

13) chain A
residue 302
type
sequence K
description binding site for residue GOL A 603
source : AC3

14) chain A
residue 150
type
sequence K
description binding site for residue GOL A 604
source : AC4

15) chain A
residue 151
type
sequence R
description binding site for residue GOL A 604
source : AC4

16) chain A
residue 278
type
sequence R
description binding site for residue GOL A 605
source : AC5

17) chain A
residue 307
type
sequence D
description binding site for residue GOL A 605
source : AC5

18) chain A
residue 309
type
sequence R
description binding site for residue GOL A 605
source : AC5

19) chain A
residue 438
type
sequence Q
description binding site for residue GOL A 606
source : AC6

20) chain A
residue 30
type
sequence L
description binding site for residue 1PE A 607
source : AC7

21) chain A
residue 33
type
sequence K
description binding site for residue 1PE A 607
source : AC7

22) chain A
residue 341
type
sequence D
description binding site for residue 1PE A 607
source : AC7

23) chain A
residue 344
type
sequence W
description binding site for residue 1PE A 607
source : AC7

24) chain A
residue 115
type
sequence Q
description binding site for residue JYD A 608
source : AC8

25) chain A
residue 116
type
sequence D
description binding site for residue JYD A 608
source : AC8

26) chain A
residue 154
type
sequence R
description binding site for residue JYD A 608
source : AC8

27) chain A
residue 196
type
sequence G
description binding site for residue JYD A 608
source : AC8

28) chain A
residue 197
type
sequence G
description binding site for residue JYD A 608
source : AC8

29) chain A
residue 404
type
sequence R
description binding site for residue JYD A 608
source : AC8

30) chain A
residue 450
type
sequence T
description binding site for residue JYD A 608
source : AC8

31) chain A
residue 451
type
sequence T
description binding site for residue JYD A 608
source : AC8

32) chain A
residue 454
type
sequence R
description binding site for residue JYD A 608
source : AC8

33) chain A
residue 474
type
sequence K
description binding site for residue JYD A 608
source : AC8

34) chain A
residue 354
type
sequence Q
description binding site for residue 1PE A 609
source : AC9

35) chain B
residue 354
type
sequence Q
description binding site for residue 1PE A 609
source : AC9

36) chain B
residue 355
type
sequence Y
description binding site for residue 1PE A 609
source : AC9

37) chain A
residue 409
type
sequence A
description binding site for residue 1PE A 610
source : AD1

38) chain A
residue 412
type
sequence R
description binding site for residue 1PE A 610
source : AD1

39) chain A
residue 413
type
sequence E
description binding site for residue 1PE A 610
source : AD1

40) chain A
residue 416
type
sequence E
description binding site for residue 1PE A 610
source : AD1

41) chain B
residue 213
type
sequence N
description binding site for residue 1PE A 610
source : AD1

42) chain B
residue 216
type
sequence S
description binding site for residue 1PE A 610
source : AD1

43) chain A
residue 463
type
sequence Q
description binding site for residue 1PE A 611
source : AD2

44) chain A
residue 466
type
sequence G
description binding site for residue 1PE A 611
source : AD2

45) chain A
residue 488
type
sequence Y
description binding site for residue 1PE A 611
source : AD2

46) chain B
residue 114
type
sequence C
description binding site for residue SF4 B 601
source : AD3

47) chain B
residue 115
type
sequence Q
description binding site for residue SF4 B 601
source : AD3

48) chain B
residue 195
type
sequence G
description binding site for residue SF4 B 601
source : AD3

49) chain B
residue 233
type
sequence C
description binding site for residue SF4 B 601
source : AD3

50) chain B
residue 328
type
sequence C
description binding site for residue SF4 B 601
source : AD3

51) chain B
residue 330
type
sequence A
description binding site for residue SF4 B 601
source : AD3

52) chain B
residue 474
type
sequence K
description binding site for residue SF4 B 601
source : AD3

53) chain B
residue 23
type
sequence H
description binding site for residue GOL B 602
source : AD4

54) chain B
residue 28
type
sequence Y
description binding site for residue GOL B 602
source : AD4

55) chain B
residue 337
type
sequence K
description binding site for residue GOL B 602
source : AD4

56) chain B
residue 520
type
sequence G
description binding site for residue GOL B 603
source : AD5

57) chain B
residue 521
type
sequence M
description binding site for residue GOL B 603
source : AD5

58) chain B
residue 115
type
sequence Q
description binding site for residue JYD B 604
source : AD6

59) chain B
residue 116
type
sequence D
description binding site for residue JYD B 604
source : AD6

60) chain B
residue 154
type
sequence R
description binding site for residue JYD B 604
source : AD6

61) chain B
residue 196
type
sequence G
description binding site for residue JYD B 604
source : AD6

62) chain B
residue 197
type
sequence G
description binding site for residue JYD B 604
source : AD6

63) chain B
residue 404
type
sequence R
description binding site for residue JYD B 604
source : AD6

64) chain B
residue 450
type
sequence T
description binding site for residue JYD B 604
source : AD6

65) chain B
residue 451
type
sequence T
description binding site for residue JYD B 604
source : AD6

66) chain B
residue 454
type
sequence R
description binding site for residue JYD B 604
source : AD6

67) chain B
residue 474
type
sequence K
description binding site for residue JYD B 604
source : AD6

68) chain B
residue 33
type
sequence K
description binding site for residue 1PE B 605
source : AD7

69) chain B
residue 341
type
sequence D
description binding site for residue 1PE B 605
source : AD7

70) chain B
residue 87
type
sequence E
description binding site for residue 1PE B 606
source : AD8

71) chain B
residue 291
type
sequence Q
description binding site for residue 1PE B 606
source : AD8

72) chain B
residue 302
type
sequence K
description binding site for residue 1PE B 606
source : AD8

73) chain C
residue 114
type
sequence C
description binding site for residue SF4 C 601
source : AD9

74) chain C
residue 115
type
sequence Q
description binding site for residue SF4 C 601
source : AD9

75) chain C
residue 195
type
sequence G
description binding site for residue SF4 C 601
source : AD9

76) chain C
residue 232
type
sequence A
description binding site for residue SF4 C 601
source : AD9

77) chain C
residue 233
type
sequence C
description binding site for residue SF4 C 601
source : AD9

78) chain C
residue 328
type
sequence C
description binding site for residue SF4 C 601
source : AD9

79) chain C
residue 330
type
sequence A
description binding site for residue SF4 C 601
source : AD9

80) chain C
residue 474
type
sequence K
description binding site for residue SF4 C 601
source : AD9

81) chain C
residue 215
type
sequence K
description binding site for residue GOL C 602
source : AE1

82) chain C
residue 216
type
sequence S
description binding site for residue GOL C 602
source : AE1

83) chain C
residue 219
type
sequence N
description binding site for residue GOL C 602
source : AE1

84) chain C
residue 354
type
sequence Q
description binding site for residue 1PE C 603
source : AE2

85) chain D
residue 80
type
sequence R
description binding site for residue 1PE C 603
source : AE2

86) chain C
residue 115
type
sequence Q
description binding site for residue JYD C 604
source : AE3

87) chain C
residue 116
type
sequence D
description binding site for residue JYD C 604
source : AE3

88) chain C
residue 154
type
sequence R
description binding site for residue JYD C 604
source : AE3

89) chain C
residue 196
type
sequence G
description binding site for residue JYD C 604
source : AE3

90) chain C
residue 197
type
sequence G
description binding site for residue JYD C 604
source : AE3

91) chain C
residue 404
type
sequence R
description binding site for residue JYD C 604
source : AE3

92) chain C
residue 450
type
sequence T
description binding site for residue JYD C 604
source : AE3

93) chain C
residue 451
type
sequence T
description binding site for residue JYD C 604
source : AE3

94) chain C
residue 454
type
sequence R
description binding site for residue JYD C 604
source : AE3

95) chain C
residue 474
type
sequence K
description binding site for residue JYD C 604
source : AE3

96) chain C
residue 87
type
sequence E
description binding site for residue 1PE C 605
source : AE4

97) chain C
residue 284
type
sequence E
description binding site for residue 1PE C 605
source : AE4

98) chain C
residue 288
type
sequence K
description binding site for residue 1PE C 605
source : AE4

99) chain C
residue 291
type
sequence Q
description binding site for residue 1PE C 605
source : AE4

100) chain C
residue 302
type
sequence K
description binding site for residue 1PE C 605
source : AE4

101) chain C
residue 78
type
sequence S
description binding site for residue 1PE C 606
source : AE5

102) chain C
residue 81
type
sequence K
description binding site for residue 1PE C 606
source : AE5

103) chain C
residue 303
type
sequence Y
description binding site for residue 1PE C 606
source : AE5

104) chain C
residue 306
type
sequence H
description binding site for residue 1PE C 606
source : AE5

105) chain C
residue 307
type
sequence D
description binding site for residue 1PE C 606
source : AE5

106) chain C
residue 309
type
sequence R
description binding site for residue 1PE C 606
source : AE5

107) chain D
residue 114
type
sequence C
description binding site for residue SF4 D 601
source : AE6

108) chain D
residue 115
type
sequence Q
description binding site for residue SF4 D 601
source : AE6

109) chain D
residue 232
type
sequence A
description binding site for residue SF4 D 601
source : AE6

110) chain D
residue 233
type
sequence C
description binding site for residue SF4 D 601
source : AE6

111) chain D
residue 328
type
sequence C
description binding site for residue SF4 D 601
source : AE6

112) chain D
residue 330
type
sequence A
description binding site for residue SF4 D 601
source : AE6

113) chain D
residue 474
type
sequence K
description binding site for residue SF4 D 601
source : AE6

114) chain D
residue 115
type
sequence Q
description binding site for residue JYD D 602
source : AE7

115) chain D
residue 116
type
sequence D
description binding site for residue JYD D 602
source : AE7

116) chain D
residue 154
type
sequence R
description binding site for residue JYD D 602
source : AE7

117) chain D
residue 197
type
sequence G
description binding site for residue JYD D 602
source : AE7

118) chain D
residue 404
type
sequence R
description binding site for residue JYD D 602
source : AE7

119) chain D
residue 450
type
sequence T
description binding site for residue JYD D 602
source : AE7

120) chain D
residue 451
type
sequence T
description binding site for residue JYD D 602
source : AE7

121) chain D
residue 454
type
sequence R
description binding site for residue JYD D 602
source : AE7

122) chain D
residue 474
type
sequence K
description binding site for residue JYD D 602
source : AE7

123) chain B
residue 487
type
sequence K
description binding site for residue 1PE D 603
source : AE8

124) chain B
residue 488
type
sequence Y
description binding site for residue 1PE D 603
source : AE8

125) chain D
residue 33
type
sequence K
description binding site for residue 1PE D 603
source : AE8

126) chain D
residue 341
type
sequence D
description binding site for residue 1PE D 603
source : AE8

127) chain A
residue 467-476
type prosite
sequence GSMVMLAKGN
description FUMARATE_LYASES Fumarate lyases signature. GSmvMlAKgN
source prosite : PS00163

128) chain A
residue 114
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:30645090, ECO:0007744|PDB:6MSO
source Swiss-Prot : SWS_FT_FI1

129) chain D
residue 114
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:30645090, ECO:0007744|PDB:6MSO
source Swiss-Prot : SWS_FT_FI1

130) chain D
residue 233
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:30645090, ECO:0007744|PDB:6MSO
source Swiss-Prot : SWS_FT_FI1

131) chain D
residue 328
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:30645090, ECO:0007744|PDB:6MSO
source Swiss-Prot : SWS_FT_FI1

132) chain A
residue 233
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:30645090, ECO:0007744|PDB:6MSO
source Swiss-Prot : SWS_FT_FI1

133) chain A
residue 328
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:30645090, ECO:0007744|PDB:6MSO
source Swiss-Prot : SWS_FT_FI1

134) chain B
residue 114
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:30645090, ECO:0007744|PDB:6MSO
source Swiss-Prot : SWS_FT_FI1

135) chain B
residue 233
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:30645090, ECO:0007744|PDB:6MSO
source Swiss-Prot : SWS_FT_FI1

136) chain B
residue 328
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:30645090, ECO:0007744|PDB:6MSO
source Swiss-Prot : SWS_FT_FI1

137) chain C
residue 114
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:30645090, ECO:0007744|PDB:6MSO
source Swiss-Prot : SWS_FT_FI1

138) chain C
residue 233
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:30645090, ECO:0007744|PDB:6MSO
source Swiss-Prot : SWS_FT_FI1

139) chain C
residue 328
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:30645090, ECO:0007744|PDB:6MSO
source Swiss-Prot : SWS_FT_FI1

140) chain A
residue 115
type BINDING
sequence Q
description BINDING => ECO:0000250|UniProtKB:E9AE57
source Swiss-Prot : SWS_FT_FI2

141) chain B
residue 197
type BINDING
sequence G
description BINDING => ECO:0000250|UniProtKB:E9AE57
source Swiss-Prot : SWS_FT_FI2

142) chain B
residue 200
type BINDING
sequence N
description BINDING => ECO:0000250|UniProtKB:E9AE57
source Swiss-Prot : SWS_FT_FI2

143) chain B
residue 404
type BINDING
sequence R
description BINDING => ECO:0000250|UniProtKB:E9AE57
source Swiss-Prot : SWS_FT_FI2

144) chain B
residue 450
type BINDING
sequence T
description BINDING => ECO:0000250|UniProtKB:E9AE57
source Swiss-Prot : SWS_FT_FI2

145) chain B
residue 474
type BINDING
sequence K
description BINDING => ECO:0000250|UniProtKB:E9AE57
source Swiss-Prot : SWS_FT_FI2

146) chain C
residue 115
type BINDING
sequence Q
description BINDING => ECO:0000250|UniProtKB:E9AE57
source Swiss-Prot : SWS_FT_FI2

147) chain C
residue 154
type BINDING
sequence R
description BINDING => ECO:0000250|UniProtKB:E9AE57
source Swiss-Prot : SWS_FT_FI2

148) chain C
residue 197
type BINDING
sequence G
description BINDING => ECO:0000250|UniProtKB:E9AE57
source Swiss-Prot : SWS_FT_FI2

149) chain C
residue 200
type BINDING
sequence N
description BINDING => ECO:0000250|UniProtKB:E9AE57
source Swiss-Prot : SWS_FT_FI2

150) chain C
residue 404
type BINDING
sequence R
description BINDING => ECO:0000250|UniProtKB:E9AE57
source Swiss-Prot : SWS_FT_FI2

151) chain A
residue 154
type BINDING
sequence R
description BINDING => ECO:0000250|UniProtKB:E9AE57
source Swiss-Prot : SWS_FT_FI2

152) chain C
residue 450
type BINDING
sequence T
description BINDING => ECO:0000250|UniProtKB:E9AE57
source Swiss-Prot : SWS_FT_FI2

153) chain C
residue 474
type BINDING
sequence K
description BINDING => ECO:0000250|UniProtKB:E9AE57
source Swiss-Prot : SWS_FT_FI2

154) chain D
residue 115
type BINDING
sequence Q
description BINDING => ECO:0000250|UniProtKB:E9AE57
source Swiss-Prot : SWS_FT_FI2

155) chain D
residue 154
type BINDING
sequence R
description BINDING => ECO:0000250|UniProtKB:E9AE57
source Swiss-Prot : SWS_FT_FI2

156) chain D
residue 197
type BINDING
sequence G
description BINDING => ECO:0000250|UniProtKB:E9AE57
source Swiss-Prot : SWS_FT_FI2

157) chain D
residue 200
type BINDING
sequence N
description BINDING => ECO:0000250|UniProtKB:E9AE57
source Swiss-Prot : SWS_FT_FI2

158) chain D
residue 404
type BINDING
sequence R
description BINDING => ECO:0000250|UniProtKB:E9AE57
source Swiss-Prot : SWS_FT_FI2

159) chain D
residue 450
type BINDING
sequence T
description BINDING => ECO:0000250|UniProtKB:E9AE57
source Swiss-Prot : SWS_FT_FI2

160) chain D
residue 474
type BINDING
sequence K
description BINDING => ECO:0000250|UniProtKB:E9AE57
source Swiss-Prot : SWS_FT_FI2

161) chain A
residue 197
type BINDING
sequence G
description BINDING => ECO:0000250|UniProtKB:E9AE57
source Swiss-Prot : SWS_FT_FI2

162) chain A
residue 200
type BINDING
sequence N
description BINDING => ECO:0000250|UniProtKB:E9AE57
source Swiss-Prot : SWS_FT_FI2

163) chain A
residue 404
type BINDING
sequence R
description BINDING => ECO:0000250|UniProtKB:E9AE57
source Swiss-Prot : SWS_FT_FI2

164) chain A
residue 450
type BINDING
sequence T
description BINDING => ECO:0000250|UniProtKB:E9AE57
source Swiss-Prot : SWS_FT_FI2

165) chain A
residue 474
type BINDING
sequence K
description BINDING => ECO:0000250|UniProtKB:E9AE57
source Swiss-Prot : SWS_FT_FI2

166) chain B
residue 115
type BINDING
sequence Q
description BINDING => ECO:0000250|UniProtKB:E9AE57
source Swiss-Prot : SWS_FT_FI2

167) chain B
residue 154
type BINDING
sequence R
description BINDING => ECO:0000250|UniProtKB:E9AE57
source Swiss-Prot : SWS_FT_FI2


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