eF-site ID 6md1-A
PDB Code 6md1
Chain A

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Title Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with GW9662 and Oleic acid
Classification TRANSCRIPTION
Compound Peroxisome proliferator-activated receptor gamma
Source (PPARG_HUMAN)
Sequence A:  ESADLRALAKHLYDSYIKSFPLTKAKARAILTGKTTDKSP
FVIYDMNSLMMGEDKIKEVAIRIFQGCQFRSVEAVQEITE
YAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDG
VLISEGQGFMTREFLKSLRKPFGDFMEPKFEFAVKFNALE
LDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALE
LQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKK
TETDMSLHPLLQEIYKD
Description


Functional site

1) chain A
residue 285
type
sequence C
description binding site for residue OLA A 501
source : AC1

2) chain A
residue 287
type
sequence F
description binding site for residue OLA A 501
source : AC1

3) chain A
residue 288
type
sequence R
description binding site for residue OLA A 501
source : AC1

4) chain A
residue 341
type
sequence I
description binding site for residue OLA A 501
source : AC1

5) chain A
residue 342
type
sequence S
description binding site for residue OLA A 501
source : AC1

6) chain A
residue 343
type
sequence E
description binding site for residue OLA A 501
source : AC1

7) chain A
residue 364
type
sequence M
description binding site for residue OLA A 501
source : AC1

8) chain A
residue 286
type BINDING
sequence Q
description BINDING => ECO:0000269|PubMed:9744270, ECO:0007744|PDB:2PRG
source Swiss-Prot : SWS_FT_FI1

9) chain A
residue 323
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:9744270, ECO:0007744|PDB:2PRG
source Swiss-Prot : SWS_FT_FI1

10) chain A
residue 449
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:9744270, ECO:0007744|PDB:2PRG
source Swiss-Prot : SWS_FT_FI1

11) chain A
residue 473
type BINDING
sequence Y
description BINDING => ECO:0000269|PubMed:9744270, ECO:0007744|PDB:2PRG
source Swiss-Prot : SWS_FT_FI1

12) chain A
residue 224
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:36737649
source Swiss-Prot : SWS_FT_FI2


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