eF-site ID 6mam-ABCDEFGHIJKL
PDB Code 6mam
Chain A, B, C, D, E, F, G, H, I, J, K, L

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Title Cleaved Ebola GP in complex with a broadly neutralizing human antibody, ADI-15946
Classification Viral protein/immune system
Compound ADI-15946 Fab Heavy Chain
Source (VGP_EBOZM)
Sequence A:  EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQA
PGKGLEWVGRIKSKTDGGTIDYAAPVKGRFTISRDDSKNT
VYLQMTSLKTEDTAVYYCTTYTEDMRYFDWLLRGGETFDY
WGQGTLVTVSSASTKGPSVFPLAPSGGTAALGCLVKDYFP
EPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSS
SLGTQTYICNVNHKPSNTKVDKKVEP
B:  DIRLTQSPSSLSASVGDRVTITCRASHYISTYLNWYQQKP
GKAPKLLIYAASNLQSGVPSRFSGSGFGTDFSLTISSLQP
EDFATYHCQQSYSTPGRYTFGQGTKVEIKRTVAAPSVFIF
PPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGN
SQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTH
QGLRSPVTKSFNRGE
C:  EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQA
PGKGLEWVGRIKSKTDGGTIDYAAPVKGRFTISRDDSKNT
VYLQMTSLKTEDTAVYYCTTYTEDMRYFDWLLRGGETFDY
WGQGTLVTVSSASTKGPSVFPLAPSGTAALGCLVKDYFPE
PVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSS
LGTQTYICNVNHKPSNTKVDKKVEPKSCDLEVD
D:  DIRLTQSPSSLSASVGDRVTITCRASHYISTYLNWYQQKP
GKAPKLLIYAASNLQSGVPSRFSGSGFGTDFSLTISSLQP
EDFATYHCQQSYSTPGRYTFGQGTKVEIKRTVAAPSVFIF
PPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGN
SQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTH
QGLRSPVTKSFNRGE
E:  EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQA
PGKGLEWVGRIKSKTDGGTIDYAAPVKGRFTISRDDSKNT
VYLQMTSLKTEDTAVYYCTTYTEDMRYFDWLLRGGETFDY
WGQGTLVTVSSASTKGPSVFPLAPSSGGTAALGCLVKDYF
PEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPS
SSLGTQTYICNVNHKPSNTKVDKKVEPCDLEVDDD
F:  DIRLTQSPSSLSASVGDRVTITCRASHYISTYLNWYQQKP
GKAPKLLIYAASNLQSGVPSRFSGSGFGTDFSLTISSLQP
EDFATYHCQQSYSTPGRYTFGQGTKVEIKRTVAAPSVFIF
PPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGN
SQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTH
QGLRSPVTKSFNRGEC
G:  SIPLGVIHNSTLQVSDVDKLVCRDKLSSTNQLRSVGLNLE
GNGVATDVPSATKRWGFRSGVPPKVVNYEAGEWAENCYNL
EIKKPDGSECLPAAPDGIRGFPRCRYVHKVSGTGPCAGDF
AFHKEGAFFLYDRLASTVIYRGTTFAEGVVAFLILPQ
H:  IVNAQPKCNPNLHYWTTQDEGAAIGLAWIPYFGPAAEGIY
IEGLMHNQDGLICGLRQLANETTQALQLFLRATTELRTFS
ILNRKAIDFLLQRWGGTCHILGPDCCIE
I:  SIPLGVIHNSTLQVSDVDKLVCRDKLSSTNQLRSVGLNLE
GNGVATDVPSATKRWGFRSGVPPKVVNYEAGEWAENCYNL
EIKKPDGSECLPAAPDGIRGFPRCRYVHKVSGTGPCAGDF
AFHKEGAFFLYDRLASTVIYRGTTFAEGVVAFLILP
J:  EAIVNAQPKCNPNLHYWTTQDEGAAIGLAWIPYFGPAAEG
IYIEGLMHNQDGLICGLRQLANETTQALQLFLRATTELRT
FSILNRKAIDFLLQRWGGTCHILGPDCCI
K:  SIPLGVIHNSTLQVSDVDKLVCRDKLSSTNQLRSVGLNLE
GNGVATDVPSATKRWGFRSGVPPKVVNYEAGEWAENCYNL
EIKKPDGSECLPAAPDGIRGFPRCRYVHKVSGTGPCAGDF
AFHKEGAFFLYDRLASTVIYRGTTFAEGVVAFLILP
L:  IVNAQPKCNPNLHYWTTQDEAIGLAWIPYFGPAAEGIYIE
GLMHNQDGLICGLRQLANETTQALQLFLRATTELRTFSIL
NRKAIDFLLQRWGGTCHILGPDCCI
Description


Functional site

1) chain B
residue 194-200
type prosite
sequence YACEVTH
description IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YACEVTH
source prosite : PS00290

2) chain A
residue 212-218
type prosite
sequence YICNVNH
description IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YACEVTH
source prosite : PS00290

3) chain G
residue 57
type SITE
sequence L
description Involved in receptor recognition and/or post-binding events => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

4) chain I
residue 88
type SITE
sequence F
description Involved in receptor recognition and/or post-binding events => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

5) chain I
residue 95
type SITE
sequence K
description Involved in receptor recognition and/or post-binding events => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

6) chain I
residue 170
type SITE
sequence I
description Involved in receptor recognition and/or post-binding events => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

7) chain K
residue 57
type SITE
sequence L
description Involved in receptor recognition and/or post-binding events => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

8) chain K
residue 63
type SITE
sequence L
description Involved in receptor recognition and/or post-binding events => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

9) chain K
residue 64
type SITE
sequence R
description Involved in receptor recognition and/or post-binding events => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

10) chain K
residue 88
type SITE
sequence F
description Involved in receptor recognition and/or post-binding events => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

11) chain K
residue 95
type SITE
sequence K
description Involved in receptor recognition and/or post-binding events => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

12) chain K
residue 170
type SITE
sequence I
description Involved in receptor recognition and/or post-binding events => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

13) chain G
residue 63
type SITE
sequence L
description Involved in receptor recognition and/or post-binding events => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

14) chain G
residue 64
type SITE
sequence R
description Involved in receptor recognition and/or post-binding events => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

15) chain G
residue 88
type SITE
sequence F
description Involved in receptor recognition and/or post-binding events => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

16) chain G
residue 95
type SITE
sequence K
description Involved in receptor recognition and/or post-binding events => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

17) chain G
residue 170
type SITE
sequence I
description Involved in receptor recognition and/or post-binding events => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

18) chain I
residue 57
type SITE
sequence L
description Involved in receptor recognition and/or post-binding events => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

19) chain I
residue 63
type SITE
sequence L
description Involved in receptor recognition and/or post-binding events => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

20) chain I
residue 64
type SITE
sequence R
description Involved in receptor recognition and/or post-binding events => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

21) chain G
residue 40
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine; by host => ECO:0000255
source Swiss-Prot : SWS_FT_FI3

22) chain I
residue 40
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine; by host => ECO:0000255
source Swiss-Prot : SWS_FT_FI3

23) chain K
residue 40
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine; by host => ECO:0000255
source Swiss-Prot : SWS_FT_FI3


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