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eF-site ID
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6kut-ABCRV |
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PDB Code
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6kut |
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Chain
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A, B, C, R, V |
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click to enlarge
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Title
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Structure of influenza D virus polymerase bound to vRNA promoter in Mode B conformation (Class B2) |
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Classification
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VIRAL PROTEIN/RNA |
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Compound
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Polymerase 3 |
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Source
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(6KUT) |
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Sequence
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A: |
VIREIAKRFLEQATINIAEEVVREYGDHERTMISVGVHFQ
ACCLISDEYTLEDETTPRYVLLEGLKRQEAISKQNNICST
LGLEPLRNLADIFDRKTRRFLEVGITKRESDEYYQEKFNK
IGNDMDIHVFTYEGKYFSNNPNGLEDIQKTRIFTFLSFVS
DELRKENMFTEMYVTEEELEMYKSKLFIAMRDESVPLPYI
NYEHLRTRCETFKRNQAECEAKVADVASRLKIKLEHLEEN
KLRPLEIPKEKEAPYTHKFLMKDAWFFAKPHDSERAQPQQ
ILYDFFEAANMGFMTTSPKPIFGKQGLMYHSLWGQTKRAI
KDKRNELEPSEQRDFLCGIGRASKKIQEDKWQESREEEFK
QEETKGAAKRGFPTWFNEEWLWAMRDSKIGDWIPMAEMPP
CKNEMEDYAKKMCEELESKIQGTNCAREMSKLIHTIGSLH
TECRNFPGKVKIVPIYCRGTLRGESTDCLFGIAIKGKSHL
NKDDGMYTVVTFEFSTEEPNPSKHEKYTVFEAGTVPVEAK
EKKLFLYCRTTGMSKLKNDWFSKCRRCLIPTMETVEQIVL
KECALKEENRVSEMLENKRAWIAHENGENLTRLVSTKLKD
LCRMLIVTQFYYCIYNDNQLEGFCNEQKKFLMFLQADKDS
KSAFTFNQKGLYEKIEECIVSNPLCIFLADRLNKLFLVAK
SNGAKYFE
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| B: |
MEINPYLLMLNNDITSMISLTYPYTGAPPMSHGTSTKYSM
ETVSRTYSYSRTKKEVPSGIFPIERRKFCNTIEDKENLEK
PNGNVDINFMLSLAEMLEEKMGKGFFKFCANEAEAEILKM
HFSKLTEGRQTYDWTSERNMPAATALQLTVDAIQETQGTF
KGTTMVEYCNKILEMMDWPEVKFKKVTLMITKIGREEFIK
RICTINTMAKDGERGKYKRRAIATPGMGIRPFSKIVETLA
QKICERLAESGLPEKKAKLKTTVSSTNSKLQEGQFMVNIT
GDNSKWNECQQPEAYLAMLAYITKDSSNLMKDLCSVAPTL
FCNKYVKMGQGFRAKNKRKTKEIVIPAKKMKERKELMNAE
WRDLFETIEPYMDGECCFLGGGMLMGMFNMLSTVFGVMTL
NYREERNCYWTGLQSSDDFVLFCISRTWPEMEMTILKFIA
VCKLMGINMSLEKSYGCLPELFEFTSMFFSGDFVSNIALE
LPAFTTAGMNEGTDFTAAMSVIRTNMINNGLSPGTALMAL
RICLQEFRATYRVHPYDSGVKNHRMKIIRKFIETIENKDG
LLISDGGKLMNNISSLHIPEEILKEDLMDPSYRNRVFNPR
NPFTQFAVVSTHSFRTRSNRTMALEEKRYQVVCNMYRSVF
ESADVNTPIGSMSMGEAIEAKILDRARTQFENGIIGGEEY
SEIKRLIEDAKRQRLS
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| C: |
SLLLTLAKEYANLTKDKKSCKLLSQGTVSSYTTFKKWTTS
RKEKNPSLRMRWAMGSKFPIMANREILEEAGIPEQWEGID
LWSKKDLGMVLASPAAITYWNFCGPGVDNSSVIKDVYKAK
FMKKERWRETLWGPMNFELVGKQRRVVETQPVEIKLNQKE
IKELTMWVLFEDEANLASKFIQENFSLVLSLRELYKGKAV
NKDVAAFMIAHQFSPEKRFLPTFGPIRPERMELLHCLGGD
FWKIEAVTAVEGFQVCEYDPRAPLIPRRDLRLIGFGKKVR
VFVGQGQEKTLVRTS
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| R: |
CUCCUGCUUAUG
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| V: |
AGCAGUAGCAAGGAG
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Description
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