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eF-site ID
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6kur-ABCRV |
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PDB Code
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6kur |
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Chain
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A, B, C, R, V |
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click to enlarge
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Title
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Structure of influenza D virus polymerase bound to vRNA promoter in Mode B conformation (Class B1) |
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Classification
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VIRAL PROTEIN/RNA |
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Compound
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Polymerase 3 |
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Source
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(6KUR) |
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Sequence
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A: |
ELEMYKSKLFIAMRDESVPLPYINYEHLRTRCETFKRNQA
ECEAKVADVASRLKIKLEHLEENKLRPLEIPKEKEAPYTH
KFLMKDAWFFAKPHDSERAQPQQILYDFFEAANMGFMTTS
PKPIFGKQGLMYHSLWGQTKRAIKDKRNELEPSEQRDFLC
GIGRASKKIQEDKWQESREEEFKQEETKGAAKRGFPTWFN
EEWLWAMRDSKIGDWIPMAEMPPCKNEMEDYAKKMCEELE
SKIQGTNCAREMSKLIHTIGSLHTECRNFPGKVKIVPIYC
RGTLRGESTDCLFGIAIKGKSHLNKDDGMYTVVTFEFSTE
EPNPSKHEKYTVFEAGTVPVEAKEKKLFLYCRTTGMSKLK
NDWFSKCRRCLIPTMETVEQIVLKECALKEENRVSEMLEN
KRAWIAHENGENLTRLVSTKLKDLCRMLIVTQFYYCIYND
NQLEGFCNEQKKFLMFLQADKDSKSAFTFNQKGLYEKIEE
CIVSNPLCIFLADRLNKLFLVAKSNGAKYFE
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| B: |
MEINPYLLMLNNDITSMISLTYPYTGAPPMSHGTSTKYSM
ETVSRTYSYSRTKKEVPSGIFPIERRKFCNTIEDKENLEK
PNGNVDINFMLSLAEMLEEKMGKGFFKFCANEAEAEILKM
HFSKLTEGRQTYDWTSERNMPAATALQLTVDAIQETQGTF
KGTTMVEYCNKILEMMDWPEVKFKKVTLMITKIGREEFIK
RICTINTMAKDGERGKYKRRAIATPGMGIRPFSKIVETLA
QKICERLAESGLPVEKKAKLKTTVSSTNSKLQEGQFMVNI
TGDNSKWNECQQPEAYLAMLAYITKDSSNLMKDLCSVAPT
LFCNKYVKMGQGFRAKNKRKTKEIVIPAKKMKERKELMNA
EWRDLFETIEPYMDGECCFLGGGMLMGMFNMLSTVFGVMT
LNYREERNCYWTGLQSSDDFVLFCISRTWPEMEMTILKFI
AVCKLMGINMSLEKSYGCLPELFEFTSMFFSGDFVSNIAL
ELPAFTTAGMNEGTDFTAAMSVIRTNMINNGLSPGTALMA
LRICLQEFRATYRVHPYDSGVKNHRMKIIRKFIETIENKD
GLLISDGGKLMNNISSLHIPEEILKEDLMDPSYRNRVFNP
RNPFTQFAVVSTHSFRTRSNRTLLNTDMRAMALEEKRYQV
VCNMYRSVFESADVNTPIGSMSMGEAIEAKILDRARTQFE
NGIIGGEEYSEIKRLIEDAKRQRLS
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| C: |
SLLLTLAKEYANLTKDKKSCKLLSQGTVSSYTTFKKWTTS
RKEKNPSLRMRWAMGSKFPIMANREILEEAGIPEQWEGID
LWSKKDLGMVLASPAAITYWNFCGPGVDNSSVIKDVYKAK
FMKKERWRETLWGPMNFELVGKQRRVVETQPVEIKLNQKE
IKELTMWVLFEDEANLASKFIQENFSLVLSLRELYKGKAV
NKDVAAFMIAHQFSPEKRFLPTFGPIRPERMELLHCLGGD
FWKIEAVTA
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| R: |
CUCCUGCUUAUGC
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| V: |
AGCAGUAGCAAGGAG
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Description
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