eF-site ID 6k2d-AB
PDB Code 6k2d
Chain A, B

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Title The crystal structure of GBP1 with LRR domain of IpaH9.8
Classification HYDROLASE/TRANSFERASE
Compound Guanylate-binding protein 1
Source (IPA9_SHIFL)
Sequence A:  IHMTGPMCLIENTNGRLMANPEALKILSAITQPMVVVAIV
GLYRTGKSYLMNKLAGKKSHTKGIWMWCVPHPKKPGHILV
LLDTEGLGDVEKGDNQNDSWIFALAVLLSSTFVYNSIGTI
NQQAMDQLYYVTELTHRIRSKSDSADFVSFFPDFVWTLRD
FPDEYLTYSLKLKKGTSQKDETFNLPRLCIRKFFPKKKCF
VFDRPVHDPEFVQQVADFCSYIFSNSKTKTLSGGIQVNGP
RLESLVLTYVNAISSGDLPCMENAVLALAQIENSAAVQKA
IAHYEQQMGQKVQLPTETLQELLDLHRDSEREAIEVFIRS
SFKDVDHLFQKELAAQLEKKRDDFCKQNQEASSDRCSALL
QVIFSPLEEEVKAGIYSKPGGYRLFVQKLQDLKKKYYEEP
RKGIQAEEILQTYLKSKESMTDAILQTD
B:  TYADYFSAWDKWEKQALPGEERDEAVSRLKECLINNSDEL
RLDRLNLSSLPDNLPAQITLLNVSYNQLTNLPELPVTLKK
LYSASNKLSELPVLPPALESLQVQHNELENLPALPDSLLT
MNISYNEIVSLPSLPQALKNLRATRNFLTELPAFSEVREY
FFDRNQISHIPESILNLRNECSIHISDNPLSSHALPALQR
LTSSPDYHGPRIYF
Description


Functional site

1) chain A
residue 207
type CROSSLNK
sequence K
description (Microbial infection) Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:29144452
source Swiss-Prot : SWS_FT_FI4

2) chain A
residue 209
type CROSSLNK
sequence K
description (Microbial infection) Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:29144452
source Swiss-Prot : SWS_FT_FI4

3) chain A
residue 210
type CROSSLNK
sequence K
description (Microbial infection) Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:29144452
source Swiss-Prot : SWS_FT_FI4

4) chain A
residue 382
type CROSSLNK
sequence K
description (Microbial infection) Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:29144452
source Swiss-Prot : SWS_FT_FI4

5) chain A
residue 156
type MOD_RES
sequence S
description Phosphoserine; by PIM1 => ECO:0000269|PubMed:37797010
source Swiss-Prot : SWS_FT_FI3

6) chain A
residue 97
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:10676968, ECO:0000269|PubMed:10970849, ECO:0007744|PDB:1F5N
source Swiss-Prot : SWS_FT_FI2

7) chain B
residue 166
type SITE
sequence R
description Sensor for substrate-binding => ECO:0000269|PubMed:33303953
source Swiss-Prot : SWS_FT_FI1

8) chain B
residue 187
type SITE
sequence F
description Sensor for substrate-binding => ECO:0000269|PubMed:33303953
source Swiss-Prot : SWS_FT_FI1


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