eF-site ID 6k2d-A
PDB Code 6k2d
Chain A

click to enlarge
Title The crystal structure of GBP1 with LRR domain of IpaH9.8
Classification HYDROLASE/TRANSFERASE
Compound Guanylate-binding protein 1
Source (IPA9_SHIFL)
Sequence A:  IHMTGPMCLIENTNGRLMANPEALKILSAITQPMVVVAIV
GLYRTGKSYLMNKLAGKKSHTKGIWMWCVPHPKKPGHILV
LLDTEGLGDVEKGDNQNDSWIFALAVLLSSTFVYNSIGTI
NQQAMDQLYYVTELTHRIRSKSDSADFVSFFPDFVWTLRD
FPDEYLTYSLKLKKGTSQKDETFNLPRLCIRKFFPKKKCF
VFDRPVHDPEFVQQVADFCSYIFSNSKTKTLSGGIQVNGP
RLESLVLTYVNAISSGDLPCMENAVLALAQIENSAAVQKA
IAHYEQQMGQKVQLPTETLQELLDLHRDSEREAIEVFIRS
SFKDVDHLFQKELAAQLEKKRDDFCKQNQEASSDRCSALL
QVIFSPLEEEVKAGIYSKPGGYRLFVQKLQDLKKKYYEEP
RKGIQAEEILQTYLKSKESMTDAILQTD
Description


Functional site

1) chain A
residue 97
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:10676968, ECO:0000269|PubMed:10970849, ECO:0007744|PDB:1F5N
source Swiss-Prot : SWS_FT_FI2

2) chain A
residue 156
type MOD_RES
sequence S
description Phosphoserine; by PIM1 => ECO:0000269|PubMed:37797010
source Swiss-Prot : SWS_FT_FI3

3) chain A
residue 207
type CROSSLNK
sequence K
description (Microbial infection) Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:29144452
source Swiss-Prot : SWS_FT_FI4

4) chain A
residue 209
type CROSSLNK
sequence K
description (Microbial infection) Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:29144452
source Swiss-Prot : SWS_FT_FI4

5) chain A
residue 210
type CROSSLNK
sequence K
description (Microbial infection) Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:29144452
source Swiss-Prot : SWS_FT_FI4

6) chain A
residue 382
type CROSSLNK
sequence K
description (Microbial infection) Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:29144452
source Swiss-Prot : SWS_FT_FI4


Display surface

Download
Links