eF-site ID 6jpb-A
PDB Code 6jpb
Chain A

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Title Rabbit Cav1.1-Diltiazem Complex
Classification MEMBRANE PROTEIN
Compound Voltage-dependent L-type calcium channel subunit alpha-1S
Source ORGANISM_COMMON: Rabbit; ORGANISM_SCIENTIFIC: Oryctolagus cuniculus;
Sequence A:  FCLTLQNPLRKACISIVEWKPFETIILLTIFANCVALAVY
LPMPEDDNNSLNLGLEKLEYFFLTVFSIEAAMKIIAYGFL
FHQDAYLRSGWNVLDFIIVFLGVFTAILEQVNVVKALRAF
RVLRPLRLVSGVPSLQVVLNSIFKAMLPLFHIALLVLFMV
IIYAIIGLELFKGKMHKTCYYIGTDIVATVENEKPSPCAR
TGSGRPCTINGSECRGGWPGPNHGITHFDNFGFSMLTVYQ
CITMEGWTDVLYWVNDAIGNEWPWIYFVTLILLGSFFILN
LVLGVLSGEFTKEREKAKSRGTFQKLREKQQLEEDLRGYM
SWITQGEVMNRVFRWKCHDLVKSRVFYWLVILIVALNTLS
IASEHHNQPLWLTHLQDIANRVLLSLFTIEMLLKMYGLGL
RQYFMSIFNRFDCFVVCSGILELLLVESGAMTPLGISVLR
CIRLLRLFKITKYWTSLSNLVASLLNSIRSIASLLLLLFL
FIIIFALLGMQLFGGRYDFEDTEVRRSNFDNFPQALISVF
QVLTGEDWNSVMYNGIMAYGGPSYPGVLVCIYFIILFVCG
NYILLNVFLAIAVDNLAEAESLTSAQKAKAEERKRRKMSV
RVLCHRIVNATWFTNFILLFILLSSAALAAEDPIRAESVR
NQILGYFDIAFTSVFTVEIVLKMTTYGYFNILDLLVVAVS
LISMVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRT
IGNIVLVTTLLQFMFACIGVQLFKGKFFSCNDLSKMTEEE
CRGYYYVYKDGDPTQMELRPRQWIHNDFHFDNVLSAMMSL
FTVSTFEGWPQLLYRAIDSNEEDMGPVYNNRVEMAIFFII
YIILIAFFMMNIFVGFVIVTFQEQGETEYKNCELDKNQRQ
CVQYALKARPLRCYIPKNPYQYQVWYVVTSSYFEYLMFAL
IMLNTICLGMQHYHQSEEMNHISDILNVAFTIIFTLEMIL
KLLAFKARGYFGDPWNVFDFLIVIGSIIDVILSEIDTFLS
AFFRLFRVMRLIKLLSRAEGVRTLLWTFIKSFQALPYVAL
LIVMLFFIYAVIGMQMFGKIALVDGTQINRNNNFQTFPQA
VLLLFRCATGEAWQEILLACSYGKLCDPESDYAPGEEYTC
GTNFAYYYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWS
ILGPHHLDEFKAIWAEYDPEAKGRIKHLDVVTLLRRIQPP
LGFGKFCPHRVACKRLVGMNMPLNSDGTVTFNATLFALVR
TALKIKTEGNFEQANEELRAIIKKIWKRTSMKLL
Description


Functional site

1) chain A
residue 1061-1118
type BINDING
sequence VGFVIVTFQEQGETEYKNCELDKNQRQCVQYALKARPLRC
YIPKNPYQYQVWYVVTSS
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI1

2) chain A
residue 1171-1180
type BINDING
sequence AFKARGYFGD
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI1

3) chain A
residue 1251-1268
type BINDING
sequence EGVRTLLWTFIKSFQALP
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI1

4) chain A
residue 484-494
type BINDING
sequence YGLGLRQYFMS
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI1

5) chain A
residue 543-561
type BINDING
sequence TSLSNLVASLLNSIRSIAS
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI1

6) chain A
residue 654-799
type BINDING
sequence NVFLAIAVDNLAEAESLTSAQKAKAEERKRRKMSVRVLCH
RIVNAT
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI1

7) chain A
residue 912-930
type BINDING
sequence KGLKHVVQCVFVAIRTIGN
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI1

8) chain A
residue 433-451
type TRANSMEM
sequence VFYWLVILIVALNTLSIAS
description Helical; Name=S1 of repeat II => ECO:0000269|PubMed:27580036
source Swiss-Prot : SWS_FT_FI10

9) chain A
residue 831-850
type TRANSMEM
sequence ILGYFDIAFTSVFTVEIVLK
description Helical; Name=S2 of repeat III => ECO:0000269|PubMed:27580036
source Swiss-Prot : SWS_FT_FI17

10) chain A
residue 893-911
type TRANSMEM
sequence VKILRVLRVLRPLRAINRA
description Helical; Name=S4 of repeat III => ECO:0000269|PubMed:27580036
source Swiss-Prot : SWS_FT_FI19

11) chain A
residue 292
type BINDING
sequence E
description BINDING => ECO:0000269|PubMed:27580036, ECO:0007744|PDB:5GJV
source Swiss-Prot : SWS_FT_FI28

12) chain A
residue 614
type BINDING
sequence E
description BINDING => ECO:0000269|PubMed:27580036, ECO:0007744|PDB:5GJV
source Swiss-Prot : SWS_FT_FI28

13) chain A
residue 1014
type BINDING
sequence E
description BINDING => ECO:0000269|PubMed:27580036, ECO:0007744|PDB:5GJV
source Swiss-Prot : SWS_FT_FI28

14) chain A
residue 463-483
type TRANSMEM
sequence LQDIANRVLLSLFTIEMLLKM
description Helical; Name=S2 of repeat II => ECO:0000269|PubMed:27580036
source Swiss-Prot : SWS_FT_FI11

15) chain A
residue 495-514
type TRANSMEM
sequence IFNRFDCFVVCSGILELLLV
description Helical; Name=S3 of repeat II => ECO:0000269|PubMed:27580036
source Swiss-Prot : SWS_FT_FI12

16) chain A
residue 524-542
type TRANSMEM
sequence ISVLRCIRLLRLFKITKYW
description Helical; Name=S4 of repeat II => ECO:0000269|PubMed:27580036
source Swiss-Prot : SWS_FT_FI13

17) chain A
residue 562-581
type TRANSMEM
sequence LLLLLFLFIIIFALLGMQLF
description Helical; Name=S5 of repeat II => ECO:0000269|PubMed:27580036
source Swiss-Prot : SWS_FT_FI14

18) chain A
residue 634-653
type TRANSMEM
sequence GVLVCIYFIILFVCGNYILL
description Helical; Name=S6 of repeat II => ECO:0000269|PubMed:27580036
source Swiss-Prot : SWS_FT_FI15

19) chain A
residue 800-818
type TRANSMEM
sequence WFTNFILLFILLSSAALAA
description Helical; Name=S1 of repeat III => ECO:0000269|PubMed:27580036
source Swiss-Prot : SWS_FT_FI16

20) chain A
residue 931-950
type TRANSMEM
sequence IVLVTTLLQFMFACIGVQLF
description Helical; Name=S5 of repeat III => ECO:0000269|PubMed:27580036
source Swiss-Prot : SWS_FT_FI20

21) chain A
residue 1039-1060
type TRANSMEM
sequence VEMAIFFIIYIILIAFFMMNIF
description Helical; Name=S6 of repeat III => ECO:0000269|PubMed:27580036
source Swiss-Prot : SWS_FT_FI21

22) chain A
residue 1119-1140
type TRANSMEM
sequence YFEYLMFALIMLNTICLGMQHY
description Helical; Name=S1 of repeat IV => ECO:0000269|PubMed:27580036
source Swiss-Prot : SWS_FT_FI22

23) chain A
residue 1149-1170
type TRANSMEM
sequence ISDILNVAFTIIFTLEMILKLL
description Helical; Name=S2 of repeat IV => ECO:0000269|PubMed:27580036
source Swiss-Prot : SWS_FT_FI23

24) chain A
residue 1181-1200
type TRANSMEM
sequence PWNVFDFLIVIGSIIDVILS
description Helical; Name=S3 of repeat IV => ECO:0000269|PubMed:27580036
source Swiss-Prot : SWS_FT_FI24

25) chain A
residue 1232-1250
type TRANSMEM
sequence SAFFRLFRVMRLIKLLSRA
description Helical; Name=S4 of repeat IV => ECO:0000269|PubMed:27580036
source Swiss-Prot : SWS_FT_FI25

26) chain A
residue 1269-1289
type TRANSMEM
sequence YVALLIVMLFFIYAVIGMQMF
description Helical; Name=S5 of repeat IV => ECO:0000269|PubMed:27580036
source Swiss-Prot : SWS_FT_FI26

27) chain A
residue 1357-1381
type TRANSMEM
sequence AYYYFISFYMLCAFLIINLFVAVIM
description Helical; Name=S6 of repeat IV => ECO:0000269|PubMed:27580036
source Swiss-Prot : SWS_FT_FI27

28) chain A
residue 951-1000
type CARBOHYD
sequence KGKFFSCNDLSKMTEEECRGYYYVYKDGDPTQMELRPRQW
IHNDFHFDNV
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI3

29) chain A
residue 1022-1038
type CARBOHYD
sequence RAIDSNEEDMGPVYNNR
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI3

30) chain A
residue 1141-1148
type CARBOHYD
sequence HQSEEMNH
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI3

31) chain A
residue 1290-1311
type CARBOHYD
sequence GKIALVDGTQINRNNNFQTFPQ
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI3

32) chain A
residue 1331-1356
type CARBOHYD
sequence ACSYGKLCDPESDYAPGEEYTCGTNF
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI3

33) chain A
residue 819-830
type CARBOHYD
sequence EDPIRAESVRNQ
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI3

34) chain A
residue 116-136
type TRANSMEM
sequence AYLRSGWNVLDFIIVFLGVFT
description Helical; Name=S3 of repeat I => ECO:0000269|PubMed:27580036
source Swiss-Prot : SWS_FT_FI5

35) chain A
residue 161-179
type TRANSMEM
sequence VKALRAFRVLRPLRLVSGV
description Helical; Name=S4 of repeat I => ECO:0000269|PubMed:27580036
source Swiss-Prot : SWS_FT_FI6

36) chain A
residue 197-218
type TRANSMEM
sequence FHIALLVLFMVIIYAIIGLELF
description Helical; Name=S5 of repeat I => ECO:0000269|PubMed:27580036
source Swiss-Prot : SWS_FT_FI7

37) chain A
residue 280-301
type INTRAMEM
sequence FSMLTVYQCITMEGWTDVLYWV
description Pore-forming => ECO:0000269|PubMed:26680202, ECO:0000269|PubMed:27580036
source Swiss-Prot : SWS_FT_FI8

38) chain A
residue 602-623
type INTRAMEM
sequence QALISVFQVLTGEDWNSVMYNG
description Pore-forming => ECO:0000269|PubMed:26680202, ECO:0000269|PubMed:27580036
source Swiss-Prot : SWS_FT_FI8

39) chain A
residue 1001-1021
type INTRAMEM
sequence LSAMMSLFTVSTFEGWPQLLY
description Pore-forming => ECO:0000269|PubMed:26680202, ECO:0000269|PubMed:27580036
source Swiss-Prot : SWS_FT_FI8

40) chain A
residue 1312-1330
type INTRAMEM
sequence AVLLLFRCATGEAWQEILL
description Pore-forming => ECO:0000269|PubMed:26680202, ECO:0000269|PubMed:27580036
source Swiss-Prot : SWS_FT_FI8

41) chain A
residue 310-330
type TRANSMEM
sequence PWIYFVTLILLGSFFILNLVL
description Helical; Name=S6 of repeat I => ECO:0000269|PubMed:27580036
source Swiss-Prot : SWS_FT_FI9

42) chain A
residue 687
type MOD_RES
sequence S
description Phosphoserine; by PKA => ECO:0000305|PubMed:2844809
source Swiss-Prot : SWS_FT_FI31

43) chain A
residue 79
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI34

44) chain A
residue 257
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0007744|PDB:5GJV
source Swiss-Prot : SWS_FT_FI35


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