eF-site ID 6jmq-A
PDB Code 6jmq
Chain A

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Title LAT1-CD98hc complex bound to MEM-108 Fab
Classification MEMBRANE PROTEIN/IMMUNE SYSTEM
Compound Large neutral amino acids transporter small subunit 1
Source (6JMQ)
Sequence A:  ITLLNGVAIIVGTIIGSGIFVTPTGVLKEAGSPGLALVVW
AACGVFSIVGALCYAELGTTISKSGGDYAYMLEVYGSLPA
FLKLWIELLIIRPSSQYIVALVFATYLLKPLFPTCPVPEE
AAKLVACLCVLLLTAVNCYSVKAATRVQDAFAAAKLLALA
LIILLGFVQIFSFEGTKLDVGNIVLALYSGLFAYGGWNYL
NFVTEEMINPYRNLPLAIIISLPIVTLVYVLTNLAYFTTL
STEQMLSSEAVAVDFGNYHLGVMSWIIPVFVGLSCFGSVN
GSLFTSSRLFFVLLTPVPSLVFTCVMTLLYAFSKDIFSVI
NFFSFFNWLCVALAIIGMIWLRHRKPELERPIKVNLALPV
FFILACLFLIAVSFWKTPVECGIGFTIILSGLPVYFFGVW
WKN
Description (1)  Large neutral amino acids transporter small subunit 1, 4F2 cell-surface antigen heavy chain, Antibody


Functional site

1) chain A
residue 105-126
type TOPO_DOM
sequence ELGTTISKSGGDYAYMLEVYGS
description Cytoplasmic => ECO:0000269|PubMed:11121428, ECO:0000269|PubMed:30867591
source Swiss-Prot : SWS_FT_FI1

2) chain A
residue 191-192
type TOPO_DOM
sequence KA
description Cytoplasmic => ECO:0000269|PubMed:11121428, ECO:0000269|PubMed:30867591
source Swiss-Prot : SWS_FT_FI1

3) chain A
residue 264-276
type TOPO_DOM
sequence TEEMINPYRNLPL
description Cytoplasmic => ECO:0000269|PubMed:11121428, ECO:0000269|PubMed:30867591
source Swiss-Prot : SWS_FT_FI1

4) chain A
residue 417-430
type TOPO_DOM
sequence WLRHRKPELERPIK
description Cytoplasmic => ECO:0000269|PubMed:11121428, ECO:0000269|PubMed:30867591
source Swiss-Prot : SWS_FT_FI1

5) chain A
residue 396-416
type TRANSMEM
sequence VINFFSFFNWLCVALAIIGMI
description Helical; Signal-anchor for type II membrane protein => ECO:0000269|PubMed:30867591
source Swiss-Prot : SWS_FT_FI2

6) chain A
residue 431-451
type TRANSMEM
sequence VNLALPVFFILACLFLIAVSF
description Helical; Signal-anchor for type II membrane protein => ECO:0000269|PubMed:30867591
source Swiss-Prot : SWS_FT_FI2

7) chain A
residue 458-478
type TRANSMEM
sequence CGIGFTIILSGLPVYFFGVWW
description Helical; Signal-anchor for type II membrane protein => ECO:0000269|PubMed:30867591
source Swiss-Prot : SWS_FT_FI2

8) chain A
residue 84-104
type TRANSMEM
sequence LALVVWAACGVFSIVGALCYA
description Helical; Signal-anchor for type II membrane protein => ECO:0000269|PubMed:30867591
source Swiss-Prot : SWS_FT_FI2

9) chain A
residue 127-147
type TRANSMEM
sequence LPAFLKLWIELLIIRPSSQYI
description Helical; Signal-anchor for type II membrane protein => ECO:0000269|PubMed:30867591
source Swiss-Prot : SWS_FT_FI2

10) chain A
residue 170-190
type TRANSMEM
sequence AAKLVACLCVLLLTAVNCYSV
description Helical; Signal-anchor for type II membrane protein => ECO:0000269|PubMed:30867591
source Swiss-Prot : SWS_FT_FI2

11) chain A
residue 193-214
type TRANSMEM
sequence ATRVQDAFAAAKLLALALIILL
description Helical; Signal-anchor for type II membrane protein => ECO:0000269|PubMed:30867591
source Swiss-Prot : SWS_FT_FI2

12) chain A
residue 243-263
type TRANSMEM
sequence IVLALYSGLFAYGGWNYLNFV
description Helical; Signal-anchor for type II membrane protein => ECO:0000269|PubMed:30867591
source Swiss-Prot : SWS_FT_FI2

13) chain A
residue 277-297
type TRANSMEM
sequence AIIISLPIVTLVYVLTNLAYF
description Helical; Signal-anchor for type II membrane protein => ECO:0000269|PubMed:30867591
source Swiss-Prot : SWS_FT_FI2

14) chain A
residue 325-345
type TRANSMEM
sequence WIIPVFVGLSCFGSVNGSLFT
description Helical; Signal-anchor for type II membrane protein => ECO:0000269|PubMed:30867591
source Swiss-Prot : SWS_FT_FI2

15) chain A
residue 370-390
type TRANSMEM
sequence LLTPVPSLVFTCVMTLLYAFS
description Helical; Signal-anchor for type II membrane protein => ECO:0000269|PubMed:30867591
source Swiss-Prot : SWS_FT_FI2

16) chain A
residue 148-169
type TOPO_DOM
sequence VALVFATYLLKPLFPTCPVPEE
description Extracellular => ECO:0000269|PubMed:11121428, ECO:0000269|PubMed:30867591
source Swiss-Prot : SWS_FT_FI3

17) chain A
residue 215-242
type TOPO_DOM
sequence GFVQIFSFEGTKLDVGN
description Extracellular => ECO:0000269|PubMed:11121428, ECO:0000269|PubMed:30867591
source Swiss-Prot : SWS_FT_FI3

18) chain A
residue 298-324
type TOPO_DOM
sequence TTLSTEQMLSSEAVAVDFGNYHLGVMS
description Extracellular => ECO:0000269|PubMed:11121428, ECO:0000269|PubMed:30867591
source Swiss-Prot : SWS_FT_FI3

19) chain A
residue 391-395
type TOPO_DOM
sequence KDIFS
description Extracellular => ECO:0000269|PubMed:11121428, ECO:0000269|PubMed:30867591
source Swiss-Prot : SWS_FT_FI3

20) chain A
residue 452-457
type TOPO_DOM
sequence WKTPVE
description Extracellular => ECO:0000269|PubMed:11121428, ECO:0000269|PubMed:30867591
source Swiss-Prot : SWS_FT_FI3


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