eF-site ID 6j6t-D
PDB Code 6j6t
Chain D

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Title Crystal Structure of HDA15 HD domain
Classification GENE REGULATION
Compound Histone deacetylase 15
Source (HDA15_ARATH)
Sequence D:  TSSTAVGFDERMLLHSEFEVKAQPHPERPDRLRAIAASLA
TAGVFPGRCLPINAREITKQELQMVHTSEHVDAVDTTSQL
LYSYFTSDTYANEYSARAARLAAGLCADLATDIFTGRVKN
GFALVRPPGHHAGVRHAMGFCLHNNAAVAALVAQAAGAKK
VLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEGGNFYPG
TGAADEVGSNGGEGYCVNVPWSCGGVGDKDYIFAFQHVVL
PIASAFSPDFVIISAGFDAARGDPLGCCDVTPAGYSRMTQ
MLGDLCGGKMLVILEGGYNLRSISASATAVIKVLLGETPS
VAGLQTVLDVLNIQLEFWPSLAISYSKLLSE
Description


Functional site

1) chain D
residue 148
type
sequence S
description binding site for residue SO4 B 604
source : AC8

2) chain D
residue 265
type
sequence K
description binding site for residue SO4 B 604
source : AC8

3) chain D
residue 313
type
sequence D
description binding site for residue ZN D 601
source : AD4

4) chain D
residue 315
type
sequence H
description binding site for residue ZN D 601
source : AD4

5) chain D
residue 404
type
sequence D
description binding site for residue ZN D 601
source : AD4

6) chain D
residue 311
type
sequence D
description binding site for residue K D 602
source : AD5

7) chain D
residue 313
type
sequence D
description binding site for residue K D 602
source : AD5

8) chain D
residue 315
type
sequence H
description binding site for residue K D 602
source : AD5

9) chain D
residue 334
type
sequence S
description binding site for residue K D 602
source : AD5

10) chain D
residue 335
type
sequence L
description binding site for residue K D 602
source : AD5

11) chain D
residue 179
type
sequence R
description binding site for residue SO4 D 603
source : AD6

12) chain D
residue 204
type
sequence T
description binding site for residue SO4 D 604
source : AD7

13) chain D
residue 205
type
sequence K
description binding site for residue SO4 D 604
source : AD7

14) chain D
residue 313
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:32878973, ECO:0007744|PDB:6J6T
source Swiss-Prot : SWS_FT_FI2

15) chain D
residue 315
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:32878973, ECO:0007744|PDB:6J6T
source Swiss-Prot : SWS_FT_FI2

16) chain D
residue 404
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:32878973, ECO:0007744|PDB:6J6T
source Swiss-Prot : SWS_FT_FI2

17) chain D
residue 444
type SITE
sequence Y
description Polarizes the scissile carbonyl of the substrate => ECO:0000269|PubMed:32878973, ECO:0007744|PDB:6J6T
source Swiss-Prot : SWS_FT_FI3

18) chain D
residue 277
type ACT_SITE
sequence H
description Proton donor/acceptor => ECO:0000305|PubMed:31061103
source Swiss-Prot : SWS_FT_FI1


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