eF-site ID 6j6t-B
PDB Code 6j6t
Chain B

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Title Crystal Structure of HDA15 HD domain
Classification GENE REGULATION
Compound Histone deacetylase 15
Source (HDA15_ARATH)
Sequence B:  ATSSTAVGFDERMLLHSEFEVKAQPHPERPDRLRAIAASL
ATAGVFPGRCLPINAREITKQELQMVHTSEHVDAVDTTSQ
LLYSYFTSDTYANEYSARAARLAAGLCADLATDIFTGRVK
NGFALVRPPGHHAGVRHAMGFCLHNNAAVAALVAQAAGAK
KVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEGGNFYP
GTGAADEVGSNGGEGYCVNVPWSCGGVGDKDYIFAFQHVV
LPIASAFSPDFVIISAGFDAARGDPLGCCDVTPAGYSRMT
QMLGDLCGGKMLVILEGGYNLRSISASATAVIKVLLGEAT
TPSVAGLQTVLDVLNIQLEFWPSLAISYSKLLSELE
Description


Functional site

1) chain B
residue 313
type
sequence D
description binding site for residue ZN B 601
source : AC5

2) chain B
residue 315
type
sequence H
description binding site for residue ZN B 601
source : AC5

3) chain B
residue 404
type
sequence D
description binding site for residue ZN B 601
source : AC5

4) chain B
residue 311
type
sequence D
description binding site for residue K B 602
source : AC6

5) chain B
residue 313
type
sequence D
description binding site for residue K B 602
source : AC6

6) chain B
residue 315
type
sequence H
description binding site for residue K B 602
source : AC6

7) chain B
residue 334
type
sequence S
description binding site for residue K B 602
source : AC6

8) chain B
residue 335
type
sequence L
description binding site for residue K B 602
source : AC6

9) chain B
residue 327
type
sequence N
description binding site for residue SO4 B 603
source : AC7

10) chain B
residue 328
type
sequence K
description binding site for residue SO4 B 603
source : AC7

11) chain B
residue 329
type
sequence S
description binding site for residue SO4 B 603
source : AC7

12) chain B
residue 445
type
sequence N
description binding site for residue SO4 B 604
source : AC8

13) chain B
residue 447
type
sequence R
description binding site for residue SO4 B 604
source : AC8

14) chain B
residue 204
type
sequence T
description binding site for residue SO4 B 605
source : AC9

15) chain B
residue 205
type
sequence K
description binding site for residue SO4 B 605
source : AC9

16) chain B
residue 246
type
sequence R
description binding site for residue SO4 B 605
source : AC9

17) chain B
residue 444
type SITE
sequence Y
description Polarizes the scissile carbonyl of the substrate => ECO:0000269|PubMed:32878973, ECO:0007744|PDB:6J6T
source Swiss-Prot : SWS_FT_FI3

18) chain B
residue 277
type ACT_SITE
sequence H
description Proton donor/acceptor => ECO:0000305|PubMed:31061103
source Swiss-Prot : SWS_FT_FI1

19) chain B
residue 313
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:32878973, ECO:0007744|PDB:6J6T
source Swiss-Prot : SWS_FT_FI2

20) chain B
residue 315
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:32878973, ECO:0007744|PDB:6J6T
source Swiss-Prot : SWS_FT_FI2

21) chain B
residue 404
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:32878973, ECO:0007744|PDB:6J6T
source Swiss-Prot : SWS_FT_FI2


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