eF-site ID 6iud-D
PDB Code 6iud
Chain D

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Title Structure of Helicobacter pylori Soj-ADP complex bound to DNA
Classification DNA BINDING PROTEIN/DNA
Compound SpoOJ regulator (Soj)
Source (6IUD)
Sequence D:  MMSEIIAVANQKGGVGKTTTAVNLAASLAVHEKKILLIDF
DPQANATSSLGFRRDKIDYDIYHVLIGRKQISQVILKTQM
PFLDLVPSNLGLAGFEKTFYDSQDENKRGELMLKNALESV
VGLYDYIIIDSPPALGPLTINSLSAAHSVIIPIQCEFFAL
EGTKLLLNTIRMLQKSTNPKLKIRGFLPTMHVPQLNLTKG
VLAELFKYFDSEFFRDSATGEYIMIPKSVKLAESPSFGKP
ILLYDIKSNGSIAYQKLAQSILQG
Description


Functional site

1) chain D
residue 12
type
sequence K
description binding site for residue ADP C 500
source : AC5

2) chain D
residue 156
type
sequence E
description binding site for residue ADP C 500
source : AC5

3) chain D
residue 14
type
sequence G
description binding site for residue ADP D 500
source : AC7

4) chain D
residue 15
type
sequence V
description binding site for residue ADP D 500
source : AC7

5) chain D
residue 16
type
sequence G
description binding site for residue ADP D 500
source : AC7

6) chain D
residue 17
type
sequence K
description binding site for residue ADP D 500
source : AC7

7) chain D
residue 18
type
sequence T
description binding site for residue ADP D 500
source : AC7

8) chain D
residue 19
type
sequence T
description binding site for residue ADP D 500
source : AC7

9) chain D
residue 190
type
sequence M
description binding site for residue ADP D 500
source : AC7

10) chain D
residue 226
type
sequence P
description binding site for residue ADP D 500
source : AC7

11) chain D
residue 227
type
sequence K
description binding site for residue ADP D 500
source : AC7

12) chain D
residue 228
type
sequence S
description binding site for residue ADP D 500
source : AC7

13) chain D
residue 232
type
sequence A
description binding site for residue ADP D 500
source : AC7

14) chain D
residue 18
type
sequence T
description binding site for residue MG D 501
source : AC8

15) chain D
residue 41
type
sequence D
description binding site for residue MG D 501
source : AC8


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