eF-site ID 6iud-ABCDEF PDB Code 6iud Chain A, B, C, D, E, F click to enlarge Title Structure of Helicobacter pylori Soj-ADP complex bound to DNA Classification DNA BINDING PROTEIN/DNA Compound SpoOJ regulator (Soj) Source (6IUD) Sequence A:  MMSEIIAVANQKGGVGKTTTAVNLAASLAVHEKKILLIDF DPQANATSSLGFRRDKIDYDIYHVLIGRKQISQVILKTQM PFLDLVPSNLGLAGFEKTFYDSQDENKRGELMLKNALESV VGLYDYIIIDSPPALGPLTINSLSAAHSVIIPIQCEFFAL EGTKLLLNTIRMLQKSTNPKLKIRGFLPTMHVPQLNLTKG VLAELFKYFDSEFFRDSATGEYIMIPKSVKLAESPSFGKP ILLYDIKSNGSIAYQKLAQSILQG B:  MMSEIIAVANQKGGVGKTTTAVNLAASLAVHEKKILLIDF DPQANATSSLGFRRDKIDYDIYHVLIGRKQISQVILKTQM PFLDLVPSNLGLAGFEKTFYDSQDENKRGELMLKNALESV VGLYDYIIIDSPPALGPLTINSLSAAHSVIIPIQCEFFAL EGTKLLLNTIRMLQKSTNPKLKIRGFLPTMHVPQLNLTKG VLAELFKYFDSEFFRDSATGEYIMIPKSVKLAESPSFGKP ILLYDIKSNGSIAYQKLAQSILQG C:  MMSEIIAVANQKGGVGKTTTAVNLAASLAVHEKKILLIDF DPQANATSSLGFRRDKIDYDIYHVLIGRKQISQVILKTQM PFLDLVPSNLGLAGFEKTFYDSQDENKRGELMLKNALESV VGLYDYIIIDSPPALGPLTINSLSAAHSVIIPIQCEFFAL EGTKLLLNTIRMLQKSTNPKLKIRGFLPTMHVPQLNLTKG VLAELFKYFDSEFFRDSATGEYIMIPKSVKLAESPSFGKP ILLYDIKSNGSIAYQKLAQSILQG D:  MMSEIIAVANQKGGVGKTTTAVNLAASLAVHEKKILLIDF DPQANATSSLGFRRDKIDYDIYHVLIGRKQISQVILKTQM PFLDLVPSNLGLAGFEKTFYDSQDENKRGELMLKNALESV VGLYDYIIIDSPPALGPLTINSLSAAHSVIIPIQCEFFAL EGTKLLLNTIRMLQKSTNPKLKIRGFLPTMHVPQLNLTKG VLAELFKYFDSEFFRDSATGEYIMIPKSVKLAESPSFGKP ILLYDIKSNGSIAYQKLAQSILQG E:  TCCCTGTTTCACGTGGAACACCCT F:  AGGGTGTTCCACGTGAAACAGGGA Description Functional site 1) chain A residue 14 type sequence G description binding site for residue ADP A 500 source : AC1 2) chain A residue 15 type sequence V description binding site for residue ADP A 500 source : AC1 3) chain A residue 16 type sequence G description binding site for residue ADP A 500 source : AC1 4) chain A residue 17 type sequence K description binding site for residue ADP A 500 source : AC1 5) chain A residue 18 type sequence T description binding site for residue ADP A 500 source : AC1 6) chain A residue 19 type sequence T description binding site for residue ADP A 500 source : AC1 7) chain A residue 190 type sequence M description binding site for residue ADP A 500 source : AC1 8) chain A residue 225 type sequence I description binding site for residue ADP A 500 source : AC1 9) chain A residue 226 type sequence P description binding site for residue ADP A 500 source : AC1 10) chain A residue 227 type sequence K description binding site for residue ADP A 500 source : AC1 11) chain A residue 228 type sequence S description binding site for residue ADP A 500 source : AC1 12) chain A residue 231 type sequence L description binding site for residue ADP A 500 source : AC1 13) chain A residue 232 type sequence A description binding site for residue ADP A 500 source : AC1 14) chain B residue 12 type sequence K description binding site for residue ADP A 500 source : AC1 15) chain B residue 156 type sequence E description binding site for residue ADP A 500 source : AC1 16) chain A residue 18 type sequence T description binding site for residue MG A 501 source : AC2 17) chain A residue 41 type sequence D description binding site for residue MG A 501 source : AC2 18) chain A residue 12 type sequence K description binding site for residue ADP B 500 source : AC3 19) chain A residue 156 type sequence E description binding site for residue ADP B 500 source : AC3 20) chain B residue 14 type sequence G description binding site for residue ADP B 500 source : AC3 21) chain B residue 15 type sequence V description binding site for residue ADP B 500 source : AC3 22) chain B residue 16 type sequence G description binding site for residue ADP B 500 source : AC3 23) chain B residue 17 type sequence K description binding site for residue ADP B 500 source : AC3 24) chain B residue 18 type sequence T description binding site for residue ADP B 500 source : AC3 25) chain B residue 19 type sequence T description binding site for residue ADP B 500 source : AC3 26) chain B residue 190 type sequence M description binding site for residue ADP B 500 source : AC3 27) chain B residue 225 type sequence I description binding site for residue ADP B 500 source : AC3 28) chain B residue 226 type sequence P description binding site for residue ADP B 500 source : AC3 29) chain B residue 227 type sequence K description binding site for residue ADP B 500 source : AC3 30) chain B residue 228 type sequence S description binding site for residue ADP B 500 source : AC3 31) chain B residue 231 type sequence L description binding site for residue ADP B 500 source : AC3 32) chain B residue 232 type sequence A description binding site for residue ADP B 500 source : AC3 33) chain B residue 18 type sequence T description binding site for residue MG B 501 source : AC4 34) chain B residue 41 type sequence D description binding site for residue MG B 501 source : AC4 35) chain C residue 14 type sequence G description binding site for residue ADP C 500 source : AC5 36) chain C residue 15 type sequence V description binding site for residue ADP C 500 source : AC5 37) chain C residue 16 type sequence G description binding site for residue ADP C 500 source : AC5 38) chain C residue 17 type sequence K description binding site for residue ADP C 500 source : AC5 39) chain C residue 18 type sequence T description binding site for residue ADP C 500 source : AC5 40) chain C residue 19 type sequence T description binding site for residue ADP C 500 source : AC5 41) chain C residue 190 type sequence M description binding site for residue ADP C 500 source : AC5 42) chain C residue 226 type sequence P description binding site for residue ADP C 500 source : AC5 43) chain C residue 227 type sequence K description binding site for residue ADP C 500 source : AC5 44) chain C residue 228 type sequence S description binding site for residue ADP C 500 source : AC5 45) chain C residue 231 type sequence L description binding site for residue ADP C 500 source : AC5 46) chain C residue 232 type sequence A description binding site for residue ADP C 500 source : AC5 47) chain D residue 12 type sequence K description binding site for residue ADP C 500 source : AC5 48) chain D residue 156 type sequence E description binding site for residue ADP C 500 source : AC5 49) chain C residue 18 type sequence T description binding site for residue MG C 501 source : AC6 50) chain C residue 41 type sequence D description binding site for residue MG C 501 source : AC6 51) chain C residue 12 type sequence K description binding site for residue ADP D 500 source : AC7 52) chain C residue 156 type sequence E description binding site for residue ADP D 500 source : AC7 53) chain C residue 158 type sequence F description binding site for residue ADP D 500 source : AC7 54) chain D residue 14 type sequence G description binding site for residue ADP D 500 source : AC7 55) chain D residue 15 type sequence V description binding site for residue ADP D 500 source : AC7 56) chain D residue 16 type sequence G description binding site for residue ADP D 500 source : AC7 57) chain D residue 17 type sequence K description binding site for residue ADP D 500 source : AC7 58) chain D residue 18 type sequence T description binding site for residue ADP D 500 source : AC7 59) chain D residue 19 type sequence T description binding site for residue ADP D 500 source : AC7 60) chain D residue 190 type sequence M description binding site for residue ADP D 500 source : AC7 61) chain D residue 226 type sequence P description binding site for residue ADP D 500 source : AC7 62) chain D residue 227 type sequence K description binding site for residue ADP D 500 source : AC7 63) chain D residue 228 type sequence S description binding site for residue ADP D 500 source : AC7 64) chain D residue 232 type sequence A description binding site for residue ADP D 500 source : AC7 65) chain D residue 18 type sequence T description binding site for residue MG D 501 source : AC8 66) chain D residue 41 type sequence D description binding site for residue MG D 501 source : AC8

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