eF-site ID 6iqw-ABCDEFI
PDB Code 6iqw
Chain A, B, C, D, E, F, I

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Title Cryo-EM structure of Csm effector complex
Classification RNA BINDING PROTEIN/RNA
Compound Csm1
Source (6IQW)
Sequence A:  MEIDELTALGGLLHDIGKPVQRAGLYSGDHSTQGARFLRD
LAENTGRAEYELLSLFSEFHHKGHMKNDELMIRRIKELSP
ERFGLTMEDVLNALWIVYEADNLASGPQASRPLYSVFNPG
KAYPWAELDFEKELPVPGDVFSIRSQDYRELVKRLWEELS
KAKLRSDRLLPVLEKYLTFVSSVTSEGNIISLYDHMRMTS
AIALAMLRAGCTAEDVRSGRCRKEKRFLLIEGDFSGIQDF
IYRVSGKGTLKYLRARSAYLELIGWDVVLEILSRLGLTRA
NVVFNAGGHFMIIAQNTPDAVKELEEIRAKAVEWLYREFE
SDLYLAIEWEPVSGREFGREGGKNLFAEARKRLKHKLTVR
KLKRFGEIKGLFEHGHTERLAECPVCGRELPEGKLEPSAS
DPETKVCPTCNRLVSLGGNLPKLLGFGRTAKNDAGVLVEG
PFSGFVPYLQGGRPVGEQILVKNTLNPGEIPESAQFVPYF
VADYFKKDPKGGVATFEELSMASTGTRRLGVMKGDVDRLG
EFFSSMDSPSKLATASRFMDYFFKGYIGAIIEGKFGYIIG
DVPSLRDWPEEPDIVVVYAGGDDFFIVGAWDQIFELAFRV
RRAFNAYTGGKLTLSVGLGYFDERTPIYRMADVVSERLDT
AKDEGRNRVFVVGRSRPLDGKHKLSYEWNHYEELWRTYAP
RIYAGNGRLKGKLESKKGLLWKLLEIRELYVRDPNDVRWA
YLTAYLLGRHGLSDLFPELVGIDTKAVERKEPQPVYWVDG
VLKIVLMAVRR
B:  QWEAIQPYFDNVVREAKNFLEWSPNKRLANAVTVAAYLTS
QGLKTNQVRKILDMARTTELKVKRGEGDIKDDLVKMRYLL
AYTVGKATGQSKYSLDAFHRILDPMLEVLMGSPKKENFEK
FYDFLQAVVAYHKF
C:  RFYGKIVIKGKIKAVTGLHIGSNPVIKDPHTGLPYIPGSS
LKGRLRSLFEILVNSRLGEWREKYPSLANYSPGSCRPDNQ
ENCGKFFNRKINRGWIHVCPDYETALACPVCRLFGASGKE
SNFPSRIIVRDAFLTKEWEEKWRAGEAITEAKIEVGIDRV
TSQANPRTNERVVAGAEFEFEIIYNVENTTHWRDDIKNLL
TAMALLEDSYLGGSGSRGYGKVKFIFDSFEFRPLDYYRTG
KDEDIVSIDAREKSVSDILSGFDSLFSEVEGKLE
D:  MDRRFYGKIVIKGKIKAVTGLHIGSQPVIKDPHTGLPYIP
GSSLKGRLRSLFEILVNSRLGEWREKYPSLANYSPGSCRP
DNQENCGKFFNRKINRGWIHVCPDYETALACPVCRLFGAS
GKESNFPSRIIVRDAFLTKEWEEKWRAGEAITEAKIEVGI
DRVTSQANPRTNERVVAGAEFEFEIIYNVENTTHWRDDIK
NLLTAMALLEDSYLGGSGSRGYGKVKFIFDSFEFRPLDYY
RTGKDEDIVSIDAREKSVSDILSGFDSLFSE
E:  PKFIAVKLIPKGPFRDIPRADTLFGAIGNAISAIHGQSAV
EELVDAFVGGARISSAFPYSGDTYYLPKPLSVEPALEGIL
TGLDEEERYTTAKRLRKAKYLDLKNFELALRLRPFTIPEE
IPYARVDVPRVVLDRVTQDSSIYFWEEIRFREKSGVYFLY
SGPREVFDGYIAPAMRFLGWGAGLFEVEFHEMKIDAPGSE
YSVTLSNALPTKTPVLWRLLRKGGWSFGRRKPRMTFIAEG
SIVKNDPGGMERLELGLSHEVYVYGLTFPLGVELPEG
F:  TERTLKVLSPLHIGTGNELTPVDIYPRENIIHVLDTERLV
NDLMNLGVELNEILALLKNPPGDAYIWKGYIEEFHLDPSD
YSIYTLKIHGSMQIKEFIKLNGRPYIPGSSLKGAIRTAVL
YKALKECGDARAVMRVVSKVNGDVARDIGRSEDVLDYYMS
FLSRARIDRKRADDLLEAIVFGMEPDRRSKIRYEPKRDPM
KALIVRDSKPVGRKHLAVYHVEVIGNPQPIPIWVEAIEPG
AATDVEIHVDTEALRLNADYFNGLLWECLKERGEPGEVFE
DFLWEAVDEFYTAVMKYETIEVQKFGRYTSQVRSFYASLE
DHSGHVLRLGKTRRLADGMPMGWVVL
I:  GUGGAAAGUGGCCCGAAACCCUUC
Description (1)  Csm1, Csm2, Csm3, Csm4, Csm5/RNA Complex


Functional site

1) chain A
residue 290
type
sequence F
description binding site for residue ATP A 801
source : AC1

2) chain A
residue 295
type
sequence H
description binding site for residue ATP A 801
source : AC1

3) chain A
residue 521
type
sequence D
description binding site for residue ATP A 801
source : AC1

4) chain A
residue 522
type
sequence V
description binding site for residue ATP A 801
source : AC1

5) chain A
residue 524
type
sequence R
description binding site for residue ATP A 801
source : AC1

6) chain A
residue 525
type
sequence L
description binding site for residue ATP A 801
source : AC1

7) chain A
residue 526
type
sequence G
description binding site for residue ATP A 801
source : AC1

8) chain A
residue 529
type
sequence F
description binding site for residue ATP A 801
source : AC1

9) chain A
residue 542
type
sequence S
description binding site for residue ATP A 801
source : AC1

10) chain A
residue 587
type
sequence G
description binding site for residue ATP A 801
source : AC1

11) chain A
residue 588
type
sequence D
description binding site for residue ATP A 801
source : AC1

12) chain A
residue 648
type
sequence K
description binding site for residue ATP A 801
source : AC1

13) chain A
residue 652
type
sequence R
description binding site for residue ATP A 801
source : AC1

14) chain E
residue 93
type
sequence A
description binding site for residue ATP A 801
source : AC1


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