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eF-site ID
|
6ilk-E |
PDB Code
|
6ilk |
Chain
|
E |
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click to enlarge
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Title
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Cryo-EM structure of Echovirus 6 complexed with its attachment receptor CD55 at PH 7.4 |
Classification
|
VIRUS |
Compound
|
Capsid protein VP1 |
Source
|
ORGANISM_SCIENTIFIC: Echovirus E6; |
|
Sequence
|
E: |
CNRSCEVPTRLNSASLKQPYITQNYFPVGTVVEYECRPGY
RREPSLSPKLTCLQNLKWSTAVEFCKKKSCPNPGEIRNGQ
IDVPGGILFGATISFSCNTGYKLFGSTSSFCLISGSSVQW
SDPLPECREIYCPAPPQIDNGIIQGERDHYGYRQSVTYAC
NKGFTMIGEHSIYCTVNNDEGEWSGPPPECRG
|
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Description
|
(1) |
Capsid protein VP1 (E.C.3.4.22.29,3.6.1.15,3.4.22.28,2.7.7.48), Capsid protein VP2 (E.C.3.4.22.29,3.6.1.15,3.4.22.28,2.7.7.48), Capsid protein VP3 (E.C.3.4.22.29,3.6.1.15,3.4.22.28,2.7.7.48), Capsid protein VP4 (E.C.3.4.22.29,3.6.1.15,3.4.22.28,2.7.7.48), Decay-accelerating factor,CD55
|
|
Functional site
|
|
1)
|
chain |
E |
residue |
63 |
type |
CARBOHYD |
sequence |
N
|
description |
N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:19159218
|
source |
Swiss-Prot : SWS_FT_FI1
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