eF-site ID 6iek-ABCDEF
PDB Code 6iek
Chain A, B, C, D, E, F

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Title Structure of RVFV Gn and human monoclonal antibody R12
Classification STRUCTURAL PROTEIN/IMMUNE SYSTEM
Compound NSmGnGc
Source (6IEK)
Sequence A:  EDPHLRNRPGKGHNYIDGMTQEDATCKPVTYAGACSSFDV
LLEKGKFPLFQSYAHHRTLLEAVHDTIIAKADPPSCDLQS
AHGNPCMKEKLVMKTHCPNDYQSAHYLNNDGKMASVKCPP
KYELTEDCNFCRQMTGASLKKGSYPLQDLFCQSSEDDGSK
LKTKMKGVCEVGVQALKKCDGQLSTAHEVVPFAVFKNSKK
VYLDKLDLKTEENLLPDSFVCFEHKELKSFDISQCPKIGG
HGSKKCTGDAAFCSAYECTAQYANAYCSHANGSGIVQIQV
SGVWKKPLCVGYERVVVKREL
B:  QVQLVQSGAEVKKPGASVKVSCKVSGYTLTELSMHWVRQA
PGKGLEWMGGFDREDGETIYAQKFQGRVTMTEDTSTDTAY
MELSSLRSEDTAVYYCAIDPIRYNWNYGDYWGQGTLVTVS
SASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTV
SWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQ
TYICNVNHKPSNTKVDKKVEPKS
C:  PVLTQPPSSSASPGESARLTCTLPSDISVSSYNIYWYQQK
PGSPPRFLLYYYSDSDKGQGSGVPSRFSGSKDASDNTGIL
LISGLQSEDEADYYCMIWPSNAWVFGGGTKLTVLGQPKAA
PSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADS
SPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYS
CQVTHEGSTVEKTVAPTE
D:  EDPHLRNRPGKGHNYIDGMTQEDATCKPVTYAGACSSFDV
LLEKGKFPLFQSYAHHRTLLEAVHDTIIAKADPPSCDLQS
AHGNPCMKEKLVMKTHCPNDYQSAHYLNNDGKMASVKCPP
KYELTEDCNFCRQMTGASLKKGSYPLQDLFCQSSEDDGSK
LKTKMKGVCEVGVQALKKCDGQLSTAHEVVPFAVFKNSKK
VYLDKLDLKTEENLLPDSFVCFEHKELKSFDISQCPKIGG
HGSKKCTGDAAFCSAYECTAQYANAYCSHANGSGIVQIQV
SGVWKKPLCVGYERVVVKREL
E:  QVQLVQSGAEVKKPGASVKVSCKVSGYTLTELSMHWVRQA
PGKGLEWMGGFDREDGETIYAQKFQGRVTMTEDTSTDTAY
MELSSLRSEDTAVYYCAIDPIRYNWNYGDYWGQGTLVTVS
SASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTV
SWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQ
TYICNVNHKPSNTKVDKKVEPKS
F:  PVLTQPPSSSASPGESARLTCTLPSDISVSSYNIYWYQQK
PGSPPRFLLYYYSDSDKGQGSGVPSRFSGSKDASDNTGIL
LISGLQSEDEADYYCMIWPSNAWVFGGGTKLTVLGQPKAA
PSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADS
SPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYS
CQVTHEGSTVEKTVAPTE
Description (1)  NSmGnGc, Heavy chain of Fab R12, Light chain of Fab R12


Functional site

1) chain B
residue 202-208
type prosite
sequence YICNVNH
description IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YICNVNH
source prosite : PS00290

2) chain C
residue 200-206
type prosite
sequence YSCQVTH
description IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YICNVNH
source prosite : PS00290


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