eF-site ID 6ide-B
PDB Code 6ide
Chain B

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Title Crystal structure of the Vibrio cholera VqmA-Ligand-DNA complex provides molecular mechanisms for drug design
Classification TRANSCRIPTION/DNA
Compound Transcriptional regulator LuxR family
Source (6IDE)
Sequence B:  PNHLTLEQISLFKQLPGYWGCKDLNSVFVYANQAYGELIG
LKRAEDCIGRTDFEMPSPTAACAAEFQQQDRYVIETGHSV
KVLDIHPYPDGHWHAHIFTKTPWRDSQGKIQGTIFFGQDL
TDTAILEVGHWVCRATGLSTSTTFTLKLTARESEVLFLLL
YGKKPQHIARVMGISIKTVEGYEAKLRSKFGALSKDQLID
LALDRGFGSVIPKTLLRKQLSVVLSDHT
Description


Functional site

1) chain B
residue 23
type
sequence K
description binding site for residue A1U B 301
source : AC2

2) chain B
residue 29
type
sequence F
description binding site for residue A1U B 301
source : AC2

3) chain B
residue 36
type
sequence Y
description binding site for residue A1U B 301
source : AC2

4) chain B
residue 53
type
sequence D
description binding site for residue A1U B 301
source : AC2

5) chain B
residue 67
type
sequence F
description binding site for residue A1U B 301
source : AC2

6) chain B
residue 85
type
sequence D
description binding site for residue A1U B 301
source : AC2

7) chain B
residue 89
type
sequence Y
description binding site for residue A1U B 301
source : AC2

8) chain B
residue 99
type
sequence F
description binding site for residue A1U B 301
source : AC2

9) chain B
residue 101
type
sequence K
description binding site for residue A1U B 301
source : AC2


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