eF-site ID 6i9d-D
PDB Code 6i9d
Chain D

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Title MloK1 consensus structure from single particle analysis of 2D crystals
Classification MEMBRANE PROTEIN
Compound Cyclic nucleotide-gated potassium channel mll3241
Source (CNGK1_RHILO)
Sequence D:  MSVLPFLRIYAPLNAVLAAPGLLAVAALTIPDMSGRSRLA
LAALLAVIWGAYLLQLAATLLKRRAGVVRDRTPKIAIDVL
AVLVPLAAFLLDGSPDWSLYCAVWLLKPLRDSTFFPVLGR
VLANEARNLIGVTTLFGVVLFAVALAAYVIERDIQPEKFG
SIPQAMWWAVVTLSTTGYGDTIPQSFAGRVLAGAVMMSGI
GIFGLWAGILATGFYQEVRRGDFVRNWQLVAAVPLFQKLG
PAVLVEIVRALRARTVPAGAVICRIGEPGDRMFFVVEGSV
SVATPNPVELGPGAFFGEMALISGEPRSATVSAATTVSLL
SLHSADFQMLCSSSPEIAEIFRKTALERRGAAASA
Description (1)  Cyclic nucleotide-gated potassium channel mll3241


Functional site

1) chain D
residue 177
type
sequence G
description binding site for residue K A 401
source : AC1

2) chain D
residue 178
type
sequence Y
description binding site for residue K A 401
source : AC1

3) chain D
residue 175
type
sequence T
description binding site for residue K A 402
source : AC2

4) chain D
residue 176
type
sequence T
description binding site for residue K A 402
source : AC2

5) chain D
residue 1-12
type TOPO_DOM
sequence MSVLPFLRIYAP
description Cytoplasmic
source Swiss-Prot : SWS_FT_FI1

6) chain D
residue 62-74
type TOPO_DOM
sequence KRRAGVVRDRTPK
description Cytoplasmic
source Swiss-Prot : SWS_FT_FI1

7) chain D
residue 113-129
type TOPO_DOM
sequence TFFPVLGRVLANEARNL
description Cytoplasmic
source Swiss-Prot : SWS_FT_FI1

8) chain D
residue 211-355
type TOPO_DOM
sequence ATGFYQEVRRGDFVRNWQLVAAVPLFQKLGPAVLVEIVRA
LRARTVPAGAVICRIGEPGDRMFFVVEGSVSVATPNPVEL
GPGAFFGEMALISGEPRSATVSAATTVSLLSLHSADFQML
CSSSPEIAEIFRKTALERRGAAASA
description Cytoplasmic
source Swiss-Prot : SWS_FT_FI1

9) chain D
residue 13-30
type TRANSMEM
sequence LNAVLAAPGLLAVAALTI
description Helical; Name=Segment S1
source Swiss-Prot : SWS_FT_FI2

10) chain D
residue 31-38
type TOPO_DOM
sequence PDMSGRSR
description Periplasmic
source Swiss-Prot : SWS_FT_FI3

11) chain D
residue 151-161
type TOPO_DOM
sequence ERDIQPEKFGS
description Periplasmic
source Swiss-Prot : SWS_FT_FI3

12) chain D
residue 181-185
type TOPO_DOM
sequence TIPQS
description Periplasmic
source Swiss-Prot : SWS_FT_FI3

13) chain D
residue 39-61
type TRANSMEM
sequence LALAALLAVIWGAYLLQLAATLL
description Helical; Name=Segment S2
source Swiss-Prot : SWS_FT_FI4

14) chain D
residue 75-94
type TRANSMEM
sequence IAIDVLAVLVPLAAFLLDGS
description Helical; Name=Segment S3
source Swiss-Prot : SWS_FT_FI5

15) chain D
residue 95-112
type TRANSMEM
sequence PDWSLYCAVWLLKPLRDS
description Helical; Name=Segment S4
source Swiss-Prot : SWS_FT_FI6

16) chain D
residue 130-150
type TRANSMEM
sequence IGVTTLFGVVLFAVALAAYVI
description Helical; Name=Segment S5
source Swiss-Prot : SWS_FT_FI7

17) chain D
residue 162-180
type INTRAMEM
sequence IPQAMWWAVVTLSTTGYGD
description Pore-forming
source Swiss-Prot : SWS_FT_FI8

18) chain D
residue 186-210
type TRANSMEM
sequence FAGRVLAGAVMMSGIGIFGLWAGIL
description Helical; Name=Segment S6
source Swiss-Prot : SWS_FT_FI9

19) chain D
residue 297
type BINDING
sequence G
description BINDING => ECO:0007744|PDB:1VP6
source Swiss-Prot : SWS_FT_FI10

20) chain D
residue 307
type BINDING
sequence R
description BINDING => ECO:0007744|PDB:1VP6
source Swiss-Prot : SWS_FT_FI10

21) chain D
residue 348
type BINDING
sequence R
description BINDING => ECO:0007744|PDB:1VP6
source Swiss-Prot : SWS_FT_FI10


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