eF-site ID 6i5c-D
PDB Code 6i5c
Chain D

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Title Long wavelength native-SAD phasing of Tubulin-Stathmin-TTL complex
Classification STRUCTURAL PROTEIN
Compound Tubulin alpha-1B chain
Source (E1BQ43_CHICK)
Sequence D:  REIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSD
LQLERINVYYNEATGNKYVPRAILVDLEPGTMDSVRSGPF
GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR
KESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPD
RIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYC
IDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLR
FPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTLTVPELT
QQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQM
LNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGN
STAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTE
AESNMNDLVSEYQQYQDATAD
Description (1)  Tubulin alpha-1B chain, Tubulin beta-2B chain, Stathmin-4, TUBULIN-TYROSINE LIGASE


Functional site

1) chain D
residue 254
type
sequence K
description binding site for residue GTP C 501
source : AD1

2) chain D
residue 10
type
sequence G
description binding site for residue GDP D 501
source : AD5

3) chain D
residue 11
type
sequence Q
description binding site for residue GDP D 501
source : AD5

4) chain D
residue 12
type
sequence C
description binding site for residue GDP D 501
source : AD5

5) chain D
residue 15
type
sequence Q
description binding site for residue GDP D 501
source : AD5

6) chain D
residue 140
type
sequence S
description binding site for residue GDP D 501
source : AD5

7) chain D
residue 143
type
sequence G
description binding site for residue GDP D 501
source : AD5

8) chain D
residue 144
type
sequence G
description binding site for residue GDP D 501
source : AD5

9) chain D
residue 145
type
sequence T
description binding site for residue GDP D 501
source : AD5

10) chain D
residue 146
type
sequence G
description binding site for residue GDP D 501
source : AD5

11) chain D
residue 178
type
sequence S
description binding site for residue GDP D 501
source : AD5

12) chain D
residue 183
type
sequence E
description binding site for residue GDP D 501
source : AD5

13) chain D
residue 206
type
sequence N
description binding site for residue GDP D 501
source : AD5

14) chain D
residue 209
type
sequence L
description binding site for residue GDP D 501
source : AD5

15) chain D
residue 224
type
sequence Y
description binding site for residue GDP D 501
source : AD5

16) chain D
residue 228
type
sequence N
description binding site for residue GDP D 501
source : AD5

17) chain D
residue 11
type
sequence Q
description binding site for residue CA D 502
source : AD6

18) chain D
residue 101
type
sequence N
description binding site for residue CA D 502
source : AD6

19) chain D
residue 326
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P07437
source Swiss-Prot : SWS_FT_FI10

20) chain D
residue 60
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate => ECO:0000250|UniProtKB:P07437
source Swiss-Prot : SWS_FT_FI9

21) chain D
residue 71
type BINDING
sequence E
description BINDING => ECO:0000250|UniProtKB:P68363
source Swiss-Prot : SWS_FT_FI2

22) chain D
residue 144
type MOD_RES
sequence G
description Phosphoserine => ECO:0007744|PubMed:22673903
source Swiss-Prot : SWS_FT_FI1

23) chain D
residue 145
type MOD_RES
sequence T
description Phosphoserine => ECO:0007744|PubMed:22673903
source Swiss-Prot : SWS_FT_FI1

24) chain D
residue 146
type MOD_RES
sequence G
description Phosphoserine => ECO:0007744|PubMed:22673903
source Swiss-Prot : SWS_FT_FI1

25) chain D
residue 206
type MOD_RES
sequence N
description Phosphoserine => ECO:0007744|PubMed:22673903
source Swiss-Prot : SWS_FT_FI1

26) chain D
residue 228
type MOD_RES
sequence N
description Phosphoserine => ECO:0007744|PubMed:22673903
source Swiss-Prot : SWS_FT_FI1

27) chain D
residue 11
type MOD_RES
sequence Q
description Phosphoserine => ECO:0007744|PubMed:22673903
source Swiss-Prot : SWS_FT_FI1

28) chain D
residue 140
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:22673903
source Swiss-Prot : SWS_FT_FI1

29) chain D
residue 174
type MOD_RES
sequence S
description Phosphoserine; by CDK1 => ECO:0000250|UniProtKB:Q9BVA1
source Swiss-Prot : SWS_FT_FI6

30) chain D
residue 287
type MOD_RES
sequence T
description Phosphothreonine => ECO:0000250|UniProtKB:P07437
source Swiss-Prot : SWS_FT_FI7

31) chain D
residue 292
type MOD_RES
sequence T
description Phosphothreonine => ECO:0000250|UniProtKB:P07437
source Swiss-Prot : SWS_FT_FI7

32) chain D
residue 40
type MOD_RES
sequence S
description Phosphoserine => ECO:0000250|UniProtKB:P99024
source Swiss-Prot : SWS_FT_FI3

33) chain D
residue 57
type MOD_RES
sequence T
description Phosphothreonine => ECO:0000250|UniProtKB:Q3KRE8
source Swiss-Prot : SWS_FT_FI4

34) chain D
residue 60
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000250|UniProtKB:P99024
source Swiss-Prot : SWS_FT_FI5

35) chain D
residue 320
type MOD_RES
sequence R
description Omega-N-methylarginine => ECO:0000250|UniProtKB:P07437
source Swiss-Prot : SWS_FT_FI8


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