eF-site ID 6hpr-ABCD
PDB Code 6hpr
Chain A, B, C, D

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Title Crystal structure of cIAP1 RING domain bound to UbcH5B-Ub and a non-covalent Ub
Classification LIGASE
Compound Baculoviral IAP repeat-containing protein 2
Source (UB2D2_HUMAN)
Sequence A:  LSLEEQLRRLQEERTCKVCMDKEVSVVFIPCGHLVVCQEC
APSLRKCPICRGIIKGTVRTFLS
B:  GGSMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR
C:  ALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPN
DSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSN
GSIKLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVP
EIARIYKTDREKYNRIAREWTQKYAM
D:  GSMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP
DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Description


Functional site

1) chain A
residue 571
type
sequence C
description binding site for residue ZN A 701
source : AC1

2) chain A
residue 574
type
sequence C
description binding site for residue ZN A 701
source : AC1

3) chain A
residue 592
type
sequence C
description binding site for residue ZN A 701
source : AC1

4) chain A
residue 595
type
sequence C
description binding site for residue ZN A 701
source : AC1

5) chain A
residue 586
type
sequence C
description binding site for residue ZN A 702
source : AC2

6) chain A
residue 588
type
sequence H
description binding site for residue ZN A 702
source : AC2

7) chain A
residue 602
type
sequence C
description binding site for residue ZN A 702
source : AC2

8) chain A
residue 605
type
sequence C
description binding site for residue ZN A 702
source : AC2

9) chain B
residue -1
type CROSSLNK
sequence G
description Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins)
source Swiss-Prot : SWS_FT_FI2

10) chain D
residue -1
type CROSSLNK
sequence G
description Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins)
source Swiss-Prot : SWS_FT_FI2

11) chain B
residue 27-52
type prosite
sequence KAKIQDKEGIPPDQQRLIFAGKQLED
description UBIQUITIN_1 Ubiquitin domain signature. KakIqDkegIPpdqQrLIFaGkqleD
source prosite : PS00299

12) chain C
residue 85
type ACT_SITE
sequence K
description Glycyl thioester intermediate => ECO:0000255|PROSITE-ProRule:PRU00388, ECO:0000255|PROSITE-ProRule:PRU10133
source Swiss-Prot : SWS_FT_FI1

13) chain D
residue -1
type ACT_SITE
sequence G
description Glycyl thioester intermediate => ECO:0000255|PROSITE-ProRule:PRU00388, ECO:0000255|PROSITE-ProRule:PRU10133
source Swiss-Prot : SWS_FT_FI1


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