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eF-site ID
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6hd7-C |
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PDB Code
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6hd7 |
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Chain
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C |
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click to enlarge
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Title
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Cryo-EM structure of the ribosome-NatA complex |
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Classification
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TRANSLATION |
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Compound
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Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA |
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Source
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ORGANISM_SCIENTIFIC: Saccharomyces cerevisiae; |
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Sequence
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C: |
VNVPKTRKTYCKGKTCRKHTQHKVTQYKAGKASLFAQGKR
RYDRKQSGFGGQTKPVFHKKAKTTKKVVLRLECVKCKTRA
QLTLKRCKHFELGGEKKQKGQALQF
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Description
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(1) |
60S ribosomal protein L42-A, 60S ribosomal protein L43-A, 60S ribosomal protein L2-A, 60S ribosomal protein L3, 60S ribosomal protein L4-A, 60S ribosomal protein L5, 60S ribosomal protein L6-A, 60S ribosomal protein L7-A, 60S ribosomal protein L8-A, 60S ribosomal protein L9-A, 60S ribosomal protein L11-A, 60S ribosomal protein L13-A, 60S ribosomal protein L14-A, 60S ribosomal protein L15-A, 60S ribosomal protein L16-A, 60S ribosomal protein L17-A, 60S ribosomal protein L18-A, 60S ribosomal protein L19-A, 60S ribosomal protein L20-A, 60S ribosomal protein L21-A, 60S ribosomal protein L22-A, 60S ribosomal protein L23-A, 60S ribosomal protein L24-A, 60S ribosomal protein L25, 60S ribosomal protein L26-A, 60S ribosomal protein L27-A, 60S ribosomal protein L28, 60S ribosomal protein L29, 60S ribosomal protein L30, 60S ribosomal protein L31-A, 60S ribosomal protein L32, 60S ribosomal protein L33-A, 60S ribosomal protein L34-A, 60S ribosomal protein L35-A, 60S ribosomal protein L36-A, 60S ribosomal protein L37-A, 60S ribosomal protein L38, 60S ribosomal protein L39, Ubiquitin-60S ribosomal protein L40, 60S ribosomal protein L41-A, ribosomal protein RPL1, 60S ribosomal protein L10, N-terminal acetyltransferase A complex subunit NAT1, N-terminal acetyltransferase A complex catalytic subunit ARD1, N-alpha-acetyltransferase NAT5, nascent polypeptide chain/RNA Complex
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Functional site
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1)
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chain |
C |
| residue |
56 |
| type |
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| sequence |
P
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| description |
binding site for residue 3HE 1 3401
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| source |
: AC1
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2)
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chain |
C |
| residue |
63-74 |
| type |
prosite |
| sequence |
KTTKKVVLRLEC
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| description |
RIBOSOMAL_L44E Ribosomal protein L44e signature. KtTKKvvLRleC
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| source |
prosite : PS01172
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