eF-site ID 6h6m-D
PDB Code 6h6m
Chain D

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Title CR10 murine norovirus protruding domain in complex with the CD300lf receptor and glycochenodeoxycholate (GCDCA)
Classification VIRAL PROTEIN
Compound Capsid protein
Source (CLM1_MOUSE)
Sequence D:  RMVDLPVLQPRLCTHARWPAPIYGLLVDPSLPSNPQWQNG
RVHVDGTLLGTTPVSGSWVSCFAAEAAYEFQSGTGEVATF
TLIEQDGSAYVPGDRAAPLGYPDFSGQLEIEVQTETTKTG
DKLKVTTFEMILGPTTNVDQAPYQGRVYASLTAVASLDLV
DGRVRAVPRSIYGFQDVIPEYNDGLLVPLAPPIGPFLPGE
VLLRFRTYMRQLDTADAAAEAIDCALPQEFISWFASNAFT
VQSDALLLRYRNTLTGQLLFECKLYSEGYIALSYSGSGPL
TFPTDGFFEVVSWVPRLFQLASV
Description


Functional site

1) chain D
residue 312
type
sequence Q
description binding site for residue CHO C 601
source : AD4

2) chain D
residue 314
type
sequence G
description binding site for residue CHO C 601
source : AD4

3) chain D
residue 340
type
sequence Q
description binding site for residue CHO C 601
source : AD4

4) chain D
residue 390
type
sequence R
description binding site for residue CHO C 601
source : AD4

5) chain D
residue 391
type
sequence V
description binding site for residue CHO C 601
source : AD4

6) chain D
residue 392
type
sequence R
description binding site for residue CHO C 601
source : AD4

7) chain D
residue 245
type
sequence W
description binding site for residue CHO D 600
source : AD9

8) chain D
residue 247
type
sequence A
description binding site for residue CHO D 600
source : AD9

9) chain D
residue 250
type
sequence Y
description binding site for residue CHO D 600
source : AD9

10) chain D
residue 435
type
sequence Y
description binding site for residue CHO D 600
source : AD9

11) chain D
residue 437
type
sequence R
description binding site for residue CHO D 600
source : AD9

12) chain D
residue 438
type
sequence Q
description binding site for residue NA D 601
source : AE1

13) chain D
residue 440
type
sequence D
description binding site for residue NA D 601
source : AE1

14) chain D
residue 447
type
sequence E
description binding site for residue NA D 601
source : AE1

15) chain D
residue 262
type
sequence P
description binding site for residue EDO D 602
source : AE2

16) chain D
residue 263
type
sequence Q
description binding site for residue EDO D 602
source : AE2

17) chain D
residue 264
type
sequence W
description binding site for residue EDO D 602
source : AE2

18) chain D
residue 403
type
sequence D
description binding site for residue EDO D 602
source : AE2

19) chain D
residue 403
type
sequence D
description binding site for residue EDO D 603
source : AE3

20) chain D
residue 448
type
sequence A
description binding site for residue EDO D 603
source : AE3

21) chain D
residue 449
type
sequence I
description binding site for residue EDO D 603
source : AE3

22) chain D
residue 450
type
sequence D
description binding site for residue EDO D 603
source : AE3


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