eF-site ID 6h6m-B
PDB Code 6h6m
Chain B

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Title CR10 murine norovirus protruding domain in complex with the CD300lf receptor and glycochenodeoxycholate (GCDCA)
Classification VIRAL PROTEIN
Compound Capsid protein
Source (CLM1_MOUSE)
Sequence B:  RMVDLPVLQPRLCTHARWPAPIYGLLVDPSLPSNPQWQNG
RVHVDGTLLGTTPVSGSWVSCFAAEAAYEFQSGTGEVATF
TLIEQDGSAYVPGDRAAPLGYPDFSGQLEIEVQTETTKTG
DKLKVTTFEMILGPTTNVDQAPYQGRVYASLTAVASLDLV
DGRVRAVPRSIYGFQDVIPEYNDGLLVPLAPPIGPFLPGE
VLLRFRTYMRQLDTADAAAEAIDCALPQEFISWFASNAFT
VQSDALLLRYRNTLTGQLLFECKLYSEGYIALSYSGSGPL
TFPTDGFFEVVSWVPRLFQLASV
Description


Functional site

1) chain B
residue 312
type
sequence Q
description binding site for residue CHO A 601
source : AC1

2) chain B
residue 314
type
sequence G
description binding site for residue CHO A 601
source : AC1

3) chain B
residue 390
type
sequence R
description binding site for residue CHO A 601
source : AC1

4) chain B
residue 391
type
sequence V
description binding site for residue CHO A 601
source : AC1

5) chain B
residue 392
type
sequence R
description binding site for residue CHO A 601
source : AC1

6) chain B
residue 239
type
sequence L
description binding site for residue EDO A 605
source : AC5

7) chain B
residue 245
type
sequence W
description binding site for residue CHO B 600
source : AC7

8) chain B
residue 247
type
sequence A
description binding site for residue CHO B 600
source : AC7

9) chain B
residue 435
type
sequence Y
description binding site for residue CHO B 600
source : AC7

10) chain B
residue 436
type
sequence M
description binding site for residue CHO B 600
source : AC7

11) chain B
residue 437
type
sequence R
description binding site for residue CHO B 600
source : AC7

12) chain B
residue 438
type
sequence Q
description binding site for residue NA B 601
source : AC8

13) chain B
residue 440
type
sequence D
description binding site for residue NA B 601
source : AC8

14) chain B
residue 447
type
sequence E
description binding site for residue NA B 601
source : AC8

15) chain B
residue 403
type
sequence D
description binding site for residue EDO B 602
source : AC9

16) chain B
residue 448
type
sequence A
description binding site for residue EDO B 602
source : AC9

17) chain B
residue 449
type
sequence I
description binding site for residue EDO B 602
source : AC9

18) chain B
residue 450
type
sequence D
description binding site for residue EDO B 602
source : AC9

19) chain B
residue 262
type
sequence P
description binding site for residue EDO B 603
source : AD1

20) chain B
residue 263
type
sequence Q
description binding site for residue EDO B 603
source : AD1

21) chain B
residue 264
type
sequence W
description binding site for residue EDO B 603
source : AD1

22) chain B
residue 403
type
sequence D
description binding site for residue EDO B 603
source : AD1

23) chain B
residue 295
type
sequence Y
description binding site for residue EDO B 604
source : AD2

24) chain B
residue 340
type
sequence Q
description binding site for residue EDO B 604
source : AD2

25) chain B
residue 341
type
sequence T
description binding site for residue EDO B 604
source : AD2

26) chain B
residue 342
type
sequence E
description binding site for residue EDO B 604
source : AD2

27) chain B
residue 387
type
sequence V
description binding site for residue EDO B 604
source : AD2

28) chain B
residue 390
type
sequence R
description binding site for residue EDO B 604
source : AD2

29) chain B
residue 391
type
sequence V
description binding site for residue EDO B 604
source : AD2

30) chain B
residue 280
type
sequence P
description binding site for residue EDO B 605
source : AD3

31) chain B
residue 281
type
sequence V
description binding site for residue EDO B 605
source : AD3

32) chain B
residue 282
type
sequence S
description binding site for residue EDO B 605
source : AD3

33) chain B
residue 285
type
sequence W
description binding site for residue EDO B 605
source : AD3

34) chain B
residue 326
type
sequence L
description binding site for residue EDO B 605
source : AD3


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