eF-site ID 6h6l-C
PDB Code 6h6l
Chain C

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Title Murine norovirus protruding domain (CW3 strain) in complex with the CD300lf receptor and glycochenodeoxycholate (GCDCA)
Classification VIRAL PROTEIN
Compound Capsid protein
Source (CLM1_MOUSE)
Sequence C:  RMVDLPVIQPRLCTHARWPAPVYGLLVDPSLPSNPQWQNG
RVHVDGTLLGTTPISGSWVSCFAAEAAYKFQSGTGEVATF
TLIEQDGSAYVPGDRAAPLGYPDFSGQLEIEVQTETTKTG
DKLKVTTFEMILGPTTNADQAPYQGRVFASVTAAASLDLV
DGRVRAVPRSIYGFQDTIPEYNDGLLVPLAPPIGPFLPGE
VLLRFRTYMRQIDTADAAAEAIDCALPQEFVSWFASNAFT
VQSEALLLRYRNTLTGQLLFECKLYNEGYIALSYGPLTFP
TDGIFEVVSWVPRLYQLASV
Description


Functional site

1) chain C
residue 366
type
sequence D
description binding site for residue MG C 601
source : AD1

2) chain C
residue 410
type
sequence D
description binding site for residue MG C 601
source : AD1

3) chain C
residue 438
type
sequence Q
description binding site for residue MG C 602
source : AD2

4) chain C
residue 440
type
sequence D
description binding site for residue MG C 602
source : AD2

5) chain C
residue 447
type
sequence E
description binding site for residue MG C 602
source : AD2

6) chain C
residue 245
type
sequence W
description binding site for residue CHO C 603
source : AD3

7) chain C
residue 247
type
sequence A
description binding site for residue CHO C 603
source : AD3

8) chain C
residue 250
type
sequence Y
description binding site for residue CHO C 603
source : AD3

9) chain C
residue 435
type
sequence Y
description binding site for residue CHO C 603
source : AD3

10) chain C
residue 436
type
sequence M
description binding site for residue CHO C 603
source : AD3

11) chain C
residue 437
type
sequence R
description binding site for residue CHO C 603
source : AD3

12) chain C
residue 364
type
sequence N
description binding site for residue NA C 604
source : AD4

13) chain C
residue 366
type
sequence D
description binding site for residue NA C 604
source : AD4

14) chain C
residue 310
type
sequence I
description binding site for residue CHO D 601
source : AD5

15) chain C
residue 312
type
sequence Q
description binding site for residue CHO D 601
source : AD5

16) chain C
residue 314
type
sequence G
description binding site for residue CHO D 601
source : AD5

17) chain C
residue 390
type
sequence R
description binding site for residue CHO D 601
source : AD5

18) chain C
residue 391
type
sequence V
description binding site for residue CHO D 601
source : AD5

19) chain C
residue 392
type
sequence R
description binding site for residue CHO D 601
source : AD5


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