eF-site ID 6h6l-A
PDB Code 6h6l
Chain A

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Title Murine norovirus protruding domain (CW3 strain) in complex with the CD300lf receptor and glycochenodeoxycholate (GCDCA)
Classification VIRAL PROTEIN
Compound Capsid protein
Source (CLM1_MOUSE)
Sequence A:  RMVDLPVIQPRLCTHARWPAPVYGLLVDPSLPSNPQWQNG
RVHVDGTLLGTTPISGSWVSCFAAEAAYKFQSGTGEVATF
TLIEQDGSAYVPGDRAAPLGYPDFSGQLEIEVQTETTKTG
DKLKVTTFEMILGPTTNADQAPYQGRVFASVTAAASLDLV
DGRVRAVPRSIYGFQDTIPEYNDGLLVPLAPPIGPFLPGE
VLLRFRTYMRQIDTADAAAEAIDCALPQEFVSWFASNAFT
VQSEALLLRYRNTLTGQLLFECKLYNEGYIALSYSPLTFP
TDGIFEVVSWVPRLYQLASV
Description


Functional site

1) chain A
residue 366
type
sequence D
description binding site for residue MG A 601
source : AC1

2) chain A
residue 410
type
sequence D
description binding site for residue MG A 601
source : AC1

3) chain A
residue 438
type
sequence Q
description binding site for residue MG A 602
source : AC2

4) chain A
residue 440
type
sequence D
description binding site for residue MG A 602
source : AC2

5) chain A
residue 447
type
sequence E
description binding site for residue MG A 602
source : AC2

6) chain A
residue 245
type
sequence W
description binding site for residue CHO A 603
source : AC3

7) chain A
residue 247
type
sequence A
description binding site for residue CHO A 603
source : AC3

8) chain A
residue 250
type
sequence Y
description binding site for residue CHO A 603
source : AC3

9) chain A
residue 435
type
sequence Y
description binding site for residue CHO A 603
source : AC3

10) chain A
residue 436
type
sequence M
description binding site for residue CHO A 603
source : AC3

11) chain A
residue 437
type
sequence R
description binding site for residue CHO A 603
source : AC3

12) chain A
residue 364
type
sequence N
description binding site for residue NA A 604
source : AC4

13) chain A
residue 366
type
sequence D
description binding site for residue NA A 604
source : AC4

14) chain A
residue 312
type
sequence Q
description binding site for residue CHO B 601
source : AC5

15) chain A
residue 314
type
sequence G
description binding site for residue CHO B 601
source : AC5

16) chain A
residue 391
type
sequence V
description binding site for residue CHO B 601
source : AC5

17) chain A
residue 392
type
sequence R
description binding site for residue CHO B 601
source : AC5


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