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eF-site ID
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6h67-C |
PDB Code
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6h67 |
Chain
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C |
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click to enlarge
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Title
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Yeast RNA polymerase I elongation complex stalled by cyclobutane pyrimidine dimer (CPD) |
Classification
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TRANSCRIPTION |
Compound
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DNA-directed RNA polymerase I subunit RPA190 |
Source
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ORGANISM_SCIENTIFIC: Saccharomyces cerevisiae (strain ATCC 204508 / S288c); |
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Sequence
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C: |
EWNVEKFKKDFEVNISSLDAREANFDLINIDTSIANAFRR
IMISEVPSVAAEYVYFFNNTSVIQDEVLAHRIGLVPLKVD
PDMLTWVDSNLPDDEKFTDENTIVLSLNVKCTRNPDAPKG
STDPKELYNNAHVYARDLKFEPQGRQSTTFADCPVVPADP
DILLAKLRPGQEISLKAHCILGIGGDHAKFSPVSTASYRL
LPQINILQPIKGESARRFQKCFPPGVIGIDEGSDEAYVKD
ARKDTVSREVLRYEEFADKVKLGRVRNHFIFNVESAGAMT
PEEIFFKSVRILKNKAEYLKNCPITQ
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Description
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(1) |
DNA-directed RNA polymerase I subunit RPA190, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerases I and III subunit RPAC1, DNA-directed RNA polymerase I subunit RPA14, DNA-directed RNA polymerases I, II, and III subunit RPABC1, DNA-directed RNA polymerases I, II, and III subunit RPABC2, DNA-directed RNA polymerase I subunit RPA43, DNA-directed RNA polymerases I, II, and III subunit RPABC3, DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerases I, II, and III subunit RPABC5, DNA-directed RNA polymerases I and III subunit RPAC2, DNA-directed RNA polymerases I, II, and III subunit RPABC4, DNA-directed RNA polymerase I subunit RPA49, DNA-directed RNA polymerase I subunit RPA34/RNA Complex
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Functional site
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|
1)
|
chain |
C |
residue |
65-105 |
type |
prosite |
sequence |
NAFRRIMISEVPSVAAEYVYFFNNTSVIQDEVLAHRIGLV
P
|
description |
RNA_POL_D_30KD RNA polymerases D / 30 to 40 Kd subunits signature. NAFRRimisevpsvAaeyVyffnNtSviqDEvLAhRIGLVP
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source |
prosite : PS00446
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