eF-site ID 6h23-A
PDB Code 6h23
Chain A

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Title Crystal structure of the hClpP Y118A mutant with an activating small molecule
Classification HYDROLASE
Compound ATP-dependent Clp protease proteolytic subunit, mitochondrial
Source (CLPP_HUMAN)
Sequence A:  DIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKK
PIHMAINSPGGVVTAGLAIYDTMQYILNPICTWCVGQAAS
MGSLLLAAGTPGMRHSLPNSRIMIHQPIAIQAEEIMKLKK
QLYNIYAKHTKQSLQVIESAMERDRYMSPMEAQEFGILDK
VLVHP
Description (1)  ATP-dependent Clp protease proteolytic subunit, mitochondrial (E.C.3.4.21.92)


Functional site

1) chain A
residue 101
type
sequence A
description binding site for residue FJT A 301
source : AC1

2) chain A
residue 104
type
sequence L
description binding site for residue FJT A 301
source : AC1

3) chain A
residue 105
type
sequence F
description binding site for residue FJT A 301
source : AC1

4) chain A
residue 108
type
sequence S
description binding site for residue FJT A 301
source : AC1

5) chain A
residue 138
type
sequence Y
description binding site for residue FJT A 301
source : AC1

6) chain A
residue 194
type
sequence Q
description binding site for residue EDO A 302
source : AC2

7) chain A
residue 195
type
sequence A
description binding site for residue EDO A 302
source : AC2

8) chain A
residue 79
type
sequence L
description binding site for residue FJT G 301
source : AD1

9) chain A
residue 82
type
sequence E
description binding site for residue FJT G 301
source : AD1

10) chain A
residue 84
type
sequence I
description binding site for residue FJT G 301
source : AD1

11) chain A
residue 146
type
sequence W
description binding site for residue FJT G 301
source : AD1

12) chain A
residue 153
type ACT_SITE
sequence S
description Nucleophile => ECO:0000269|PubMed:11923310
source Swiss-Prot : SWS_FT_FI1

13) chain A
residue 178
type ACT_SITE
sequence H
description ACT_SITE => ECO:0000250
source Swiss-Prot : SWS_FT_FI2

14) chain A
residue 145-156
type prosite
sequence TWCVGQAASMGS
description CLP_PROTEASE_SER Endopeptidase Clp serine active site. TwcVGqAASMGS
source prosite : PS00381

15) chain A
residue 167-180
type prosite
sequence RHSLPNSRIMIHQP
description CLP_PROTEASE_HIS Endopeptidase Clp histidine active site. RhslPnsrIMIHQP
source prosite : PS00382

16) chain A
residue 200
type MOD_RES
sequence K
description N6-succinyllysine => ECO:0000250|UniProtKB:O88696
source Swiss-Prot : SWS_FT_FI3

17) chain A
residue 211
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0007744|PubMed:19608861
source Swiss-Prot : SWS_FT_FI4


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