eF-site ID 6h0f-B
PDB Code 6h0f
Chain B

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Title Structure of DDB1-CRBN-pomalidomide complex bound to IKZF1(ZF2)
Classification SIGNALING PROTEIN
Compound DNA damage-binding protein 1,DNA damage-binding protein 1,DNA damage-binding protein 1,DNA damage-binding protein 1
Source (IKZF1_HUMAN)
Sequence B:  GRTLHDDDSCQVIPVLPQVMMILIPGQTLPLQLFHPQEVS
MVRNLIQKDRTFAVLAYSNVQEREAQFGTTAEIYAYREEQ
DFGIEIVKVKAIGRQRFKVLELRTQSDGIQQAKVQILPEC
VLPSTMSAVQLESLNKCQIFPSKPVSREDQCSYKWWQKYQ
KRKFHCANLTSWPRWLYSLYDAETLMDRIKKQLREWDENL
KDDSLPSNPIDFSYRVAACLPIDDVLRIQLLKIGSAIQRL
RCELDIMNKCTSLCCKQCQETEITTKNEIFSLSLCGPMAA
YVNPHGYVHETLTVYKACNLNLIGRPSTEHSWFPGYAWTV
AQCKICASHIGWKFTATKKDMSPQKFWGLTRSALLPTIPD
TEDEISPDKVILCL
Description


Functional site

1) chain B
residue 323
type
sequence C
description binding site for residue ZN B 501
source : AC1

2) chain B
residue 326
type
sequence C
description binding site for residue ZN B 501
source : AC1

3) chain B
residue 391
type
sequence C
description binding site for residue ZN B 501
source : AC1

4) chain B
residue 394
type
sequence C
description binding site for residue ZN B 501
source : AC1

5) chain B
residue 351
type
sequence N
description binding site for residue Y70 B 502
source : AC2

6) chain B
residue 352
type
sequence P
description binding site for residue Y70 B 502
source : AC2

7) chain B
residue 353
type
sequence H
description binding site for residue Y70 B 502
source : AC2

8) chain B
residue 377
type
sequence E
description binding site for residue Y70 B 502
source : AC2

9) chain B
residue 378
type
sequence H
description binding site for residue Y70 B 502
source : AC2

10) chain B
residue 380
type
sequence W
description binding site for residue Y70 B 502
source : AC2

11) chain B
residue 386
type
sequence W
description binding site for residue Y70 B 502
source : AC2

12) chain B
residue 400
type
sequence W
description binding site for residue Y70 B 502
source : AC2

13) chain B
residue 402
type
sequence F
description binding site for residue Y70 B 502
source : AC2

14) chain B
residue 386
type MOD_RES
sequence W
description N-acetylserine => ECO:0007744|PubMed:19413330
source Swiss-Prot : SWS_FT_FI1

15) chain B
residue 391
type MOD_RES
sequence C
description N-acetylserine => ECO:0007744|PubMed:19413330
source Swiss-Prot : SWS_FT_FI1

16) chain B
residue 394
type MOD_RES
sequence C
description N-acetylserine => ECO:0007744|PubMed:19413330
source Swiss-Prot : SWS_FT_FI1


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