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eF-site ID
|
6h03-T |
PDB Code
|
6h03 |
Chain
|
T |
|
click to enlarge
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Title
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OPEN CONFORMATION OF THE MEMBRANE ATTACK COMPLEX |
Classification
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IMMUNE SYSTEM |
Compound
|
Complement C5,Complement C5 |
Source
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ORGANISM_COMMON: Human; ORGANISM_SCIENTIFIC: Homo sapiens; |
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Sequence
|
T: |
SHIDCRMSPWSEWSQCDPCLRQMFRSRSIEVFGQFNGKRC
TDAVGDRRQCVPTEPCEDAEDDCGNDFQCSTGRCIKMRLR
CNGDNDCGDFSDEDDCESEPRPPCRDRVVEESELARTAGY
GINILGMDPLSTPFDNEFYNGLCNRDRDGNTLTYYRRPWN
VASLIYETKGEKNFRTEHYEEQIEAFKSIIQEKTSNFNAA
ISLKFTPSLHGKGSFRFSYSKNETYQLFLSYSSKKEKMFL
HVKGEIHLGRFVMRNRDVVLTTTFVDDIKALPTTYEKGEY
FAFLETYGTHYSSSGSLGGLYELIYVLDKASMKRKGVELK
DIKRCLGYHLDVSLAFSEISVGAEFNKDDCVKRGEGRAVN
ITSENLIDDVVSLIRGGTRKYAFELKEKLLRGTVIDVTDF
VNWASSINDAPVLISQKLSPIYNLVPVKMKNAHLKKQNLE
RAIEDYINEFSVRKCHTCQNGGTVILMDGKCLCACPFKFE
GIACEISKQKISEGLPALEFP
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Description
|
(1) |
COMPLEMENT C5,COMPLEMENT C5, COMPLEMENT COMPONENT C6, COMPLEMENT COMPONENT C8 BETA CHAIN, COMPLEMENT COMPONENT C7, COMPLEMENT COMPONENT C8 GAMMA CHAIN, COMPLEMENT COMPONENT C8 ALPHA CHAIN, COMPLEMENT COMPONENT C9
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Functional site
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1)
|
chain |
T |
residue |
293-309 |
type |
TRANSMEM |
sequence |
VLTTTFVDDIKALPTTY
|
description |
Beta stranded => ECO:0000255
|
source |
Swiss-Prot : SWS_FT_FI1
|
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2)
|
chain |
T |
residue |
314-333 |
type |
TRANSMEM |
sequence |
YFAFLETYGTHYSSSGSLGG
|
description |
Beta stranded => ECO:0000255
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
3)
|
chain |
T |
residue |
244 |
type |
SITE |
sequence |
H
|
description |
Cleavage; by thrombin
|
source |
Swiss-Prot : SWS_FT_FI2
|
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4)
|
chain |
T |
residue |
27 |
type |
CARBOHYD |
sequence |
W
|
description |
C-linked (Man) tryptophan => ECO:0000269|PubMed:10551839
|
source |
Swiss-Prot : SWS_FT_FI3
|
|
5)
|
chain |
T |
residue |
30 |
type |
CARBOHYD |
sequence |
W
|
description |
C-linked (Man) tryptophan; partial => ECO:0000269|PubMed:10551839
|
source |
Swiss-Prot : SWS_FT_FI4
|
|
6)
|
chain |
T |
residue |
256 |
type |
CARBOHYD |
sequence |
N
|
description |
N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:16335952, ECO:0000269|PubMed:19159218, ECO:0000269|PubMed:4055801
|
source |
Swiss-Prot : SWS_FT_FI5
|
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7)
|
chain |
T |
residue |
394 |
type |
CARBOHYD |
sequence |
N
|
description |
N-linked (GlcNAc...) (complex) asparagine => ECO:0000269|PubMed:14760718, ECO:0000269|PubMed:16263699, ECO:0000269|PubMed:16335952, ECO:0000269|PubMed:19139490, ECO:0000269|PubMed:19159218, ECO:0000269|PubMed:4055801
|
source |
Swiss-Prot : SWS_FT_FI6
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