eF-site ID 6gxq-A
PDB Code 6gxq
Chain A

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Title Crystal structure of T. brucei PDE-B1 catalytic domain with inhibitor NPD-1335
Classification HYDROLASE
Compound Phosphodiesterase
Source (Q8WQX9_9TRYP)
Sequence A:  VTAITKVEREAVLVCELPSFDVTDVEFDLFRARESTDKPL
DVAAAIAYRLLLGSGLPQKFGCSDEVLLNFILQCRKKYRN
VPYHNFYHVVDVCQTIHTFLYRGNVYEKLTELECFVLLIT
ALVHDLDHMGLNNSFYLKTESPLGILSSASGNTSVLEVHH
CNLAVEILSDPESDVFDGLEGAERTLAFRSMIDCVLATDM
AKHGSALEAFLASAADQSSDEAAFHRMTMEIILKAGDISN
VTKPFDISRQWAMAVTEEFYRQGDMEKERGVEVLPMFDRS
KNMELAKGQIGFIDFVAAPFFQKIVDACLQGMQWTVDRIK
SNRAQWERVLETR
Description


Functional site

1) chain A
residue 710
type
sequence D
description binding site for residue MG A 1001
source : AC1

2) chain A
residue 673
type
sequence H
description binding site for residue ZN A 1002
source : AC2

3) chain A
residue 709
type
sequence H
description binding site for residue ZN A 1002
source : AC2

4) chain A
residue 710
type
sequence D
description binding site for residue ZN A 1002
source : AC2

5) chain A
residue 822
type
sequence D
description binding site for residue ZN A 1002
source : AC2

6) chain A
residue 644
type
sequence K
description binding site for residue GAI A 1003
source : AC3

7) chain A
residue 768
type
sequence E
description binding site for residue GAI A 1003
source : AC3

8) chain A
residue 753
type
sequence L
description binding site for residue GAI A 1004
source : AC4

9) chain A
residue 754
type
sequence S
description binding site for residue GAI A 1004
source : AC4

10) chain A
residue 759
type
sequence D
description binding site for residue GAI A 1004
source : AC4

11) chain A
residue 762
type
sequence D
description binding site for residue GAI A 1004
source : AC4

12) chain A
residue 769
type
sequence R
description binding site for residue GAI A 1004
source : AC4

13) chain A
residue 915
type
sequence L
description binding site for residue GAI A 1004
source : AC4

14) chain A
residue 785
type
sequence M
description binding site for residue FFZ A 1005
source : AC5

15) chain A
residue 822
type
sequence D
description binding site for residue FFZ A 1005
source : AC5

16) chain A
residue 825
type
sequence N
description binding site for residue FFZ A 1005
source : AC5

17) chain A
residue 873
type
sequence G
description binding site for residue FFZ A 1005
source : AC5

18) chain A
residue 874
type
sequence Q
description binding site for residue FFZ A 1005
source : AC5

19) chain A
residue 877
type
sequence F
description binding site for residue FFZ A 1005
source : AC5

20) chain A
residue 692
type
sequence E
description binding site for residue GAI A 1006
source : AC6

21) chain A
residue 613
type
sequence D
description binding site for residue GOL A 1007
source : AC7

22) chain A
residue 829
type
sequence P
description binding site for residue GOL A 1007
source : AC7

23) chain A
residue 830
type
sequence F
description binding site for residue GOL A 1007
source : AC7

24) chain A
residue 831
type
sequence D
description binding site for residue GOL A 1007
source : AC7

25) chain A
residue 832
type
sequence I
description binding site for residue GOL A 1007
source : AC7

26) chain A
residue 709-720
type prosite
sequence HDLDHMGLNNSF
description PDEASE_I_1 3'5'-cyclic nucleotide phosphodiesterase domain signature. HDLdHmGlnNsF
source prosite : PS00126


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