|
|
eF-site ID
|
6gwy-A |
|
PDB Code
|
6gwy |
|
Chain
|
A |
|
click to enlarge
|
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|
Title
|
Blood group synthase AAGlyB in its apo form cryoprotected with glycerol |
|
Classification
|
TRANSFERASE |
|
Compound
|
ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase transferase B, alpha 1-3-galactosyltransferase) |
|
Source
|
(F0X360_HUMAN) |
|
|
Sequence
|
A: |
AIGEFMVSLPRMVYPQPKVLTPCRKDVLVVTPWLAPIVWE
GTFNIDILNEQFRLQNTTIGLTVFAIKKYVAFLKLFLETA
EKHFMVGHRVHYYVFTDQPAAVPRVTLGTGRQLSVLEVRA
YKRWQDVSMRRMEMISDFCERRFLSEVDYLVCVDVDMEFR
DHVGVEILTPLFGTLHPGFYGSSREAFTYERRPQSQAYIP
KDEGDFYYGGAFFGGSVQEVQRLTRACHQAMMVDQANGIE
AVWHDESHLNKYLLRHKPTKVLSPEYLWDQQLLGWPAVLR
KLRFTAVP
|
|
|
Description
|
|
Functional site
|
|
|
1)
|
chain |
A |
| residue |
233 |
| type |
|
| sequence |
H
|
| description |
binding site for residue GOL A 401
|
| source |
: AC1
|
|
|
2)
|
chain |
A |
| residue |
236 |
| type |
|
| sequence |
F
|
| description |
binding site for residue GOL A 401
|
| source |
: AC1
|
|
|
3)
|
chain |
A |
| residue |
245 |
| type |
|
| sequence |
T
|
| description |
binding site for residue GOL A 401
|
| source |
: AC1
|
|
|
4)
|
chain |
A |
| residue |
300 |
| type |
|
| sequence |
W
|
| description |
binding site for residue GOL A 401
|
| source |
: AC1
|
|
|
5)
|
chain |
A |
| residue |
303 |
| type |
|
| sequence |
E
|
| description |
binding site for residue GOL A 401
|
| source |
: AC1
|
|
|
6)
|
chain |
A |
| residue |
58 |
| type |
|
| sequence |
A
|
| description |
binding site for residue GOL A 402
|
| source |
: AC2
|
|
|
7)
|
chain |
A |
| residue |
113 |
| type |
|
| sequence |
N
|
| description |
binding site for residue GOL A 402
|
| source |
: AC2
|
|
|
8)
|
chain |
A |
| residue |
115 |
| type |
|
| sequence |
T
|
| description |
binding site for residue GOL A 402
|
| source |
: AC2
|
|
|
9)
|
chain |
A |
| residue |
146 |
| type |
|
| sequence |
R
|
| description |
binding site for residue GOL A 402
|
| source |
: AC2
|
|
|
10)
|
chain |
A |
| residue |
202 |
| type |
|
| sequence |
S
|
| description |
binding site for residue GOL A 402
|
| source |
: AC2
|
|
|
11)
|
chain |
A |
| residue |
203 |
| type |
|
| sequence |
E
|
| description |
binding site for residue GOL A 402
|
| source |
: AC2
|
|
|
12)
|
chain |
A |
| residue |
204 |
| type |
|
| sequence |
V
|
| description |
binding site for residue GOL A 402
|
| source |
: AC2
|
|
|
13)
|
chain |
A |
| residue |
205 |
| type |
|
| sequence |
D
|
| description |
binding site for residue GOL A 402
|
| source |
: AC2
|
|
|
14)
|
chain |
A |
| residue |
106 |
| type |
|
| sequence |
N
|
| description |
binding site for residue GOL A 403
|
| source |
: AC3
|
|
|
15)
|
chain |
A |
| residue |
107 |
| type |
|
| sequence |
E
|
| description |
binding site for residue GOL A 403
|
| source |
: AC3
|
|
|
16)
|
chain |
A |
| residue |
110 |
| type |
|
| sequence |
R
|
| description |
binding site for residue GOL A 403
|
| source |
: AC3
|
|
|
17)
|
chain |
A |
| residue |
144 |
| type |
|
| sequence |
G
|
| description |
binding site for residue GOL A 403
|
| source |
: AC3
|
|
|
18)
|
chain |
A |
| residue |
165 |
| type |
|
| sequence |
G
|
| description |
binding site for residue GOL A 403
|
| source |
: AC3
|
|
|
19)
|
chain |
A |
| residue |
110 |
| type |
|
| sequence |
R
|
| description |
binding site for residue SO4 A 404
|
| source |
: AC4
|
|
|
20)
|
chain |
A |
| residue |
113 |
| type |
|
| sequence |
N
|
| description |
binding site for residue SO4 A 404
|
| source |
: AC4
|
|
|
21)
|
chain |
A |
| residue |
146 |
| type |
|
| sequence |
R
|
| description |
binding site for residue SO4 A 404
|
| source |
: AC4
|
|
|
22)
|
chain |
A |
| residue |
166 |
| type |
|
| sequence |
T
|
| description |
binding site for residue SO4 A 404
|
| source |
: AC4
|
|
|
23)
|
chain |
A |
| residue |
167 |
| type |
|
| sequence |
G
|
| description |
binding site for residue SO4 A 404
|
| source |
: AC4
|
|
|
24)
|
chain |
A |
| residue |
303 |
| type |
ACT_SITE |
| sequence |
E
|
| description |
Nucleophile => ECO:0000250|UniProtKB:P14769
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
25)
|
chain |
A |
| residue |
113 |
| type |
CARBOHYD |
| sequence |
N
|
| description |
N-linked (GlcNAc...) asparagine => ECO:0000255
|
| source |
Swiss-Prot : SWS_FT_FI9
|
|
|
26)
|
chain |
A |
| residue |
121 |
| type |
BINDING |
| sequence |
F
|
| description |
BINDING => ECO:0000269|PubMed:12198488, ECO:0000269|PubMed:12972418, ECO:0000269|PubMed:15475562, ECO:0000269|PubMed:16326711, ECO:0000269|PubMed:17259183, ECO:0007744|PDB:1LZI, ECO:0007744|PDB:1LZJ, ECO:0007744|PDB:1R7Y, ECO:0007744|PDB:1R80, ECO:0007744|PDB:1R81, ECO:0007744|PDB:1R82, ECO:0007744|PDB:1WT3, ECO:0007744|PDB:1ZI5, ECO:0007744|PDB:1ZJ2, ECO:0007744|PDB:1ZJO, ECO:0007744|PDB:1ZJP, ECO:0007744|PDB:2A8U, ECO:0007744|PDB:2A8W, ECO:0007744|PDB:2O1H, ECO:0007744|PDB:2RIX, ECO:0007744|PDB:2RJ0, ECO:0007744|PDB:2RJ1, ECO:0007744|PDB:2RJ4, ECO:0007744|PDB:2RJ5, ECO:0007744|PDB:2RJ7, ECO:0007744|PDB:2RJ8, ECO:0007744|PDB:2RJ9, ECO:0007744|PDB:2Y7A, ECO:0007744|PDB:3I0D, ECO:0007744|PDB:3I0F, ECO:0007744|PDB:3I0G, ECO:0007744|PDB:3I0I, ECO:0007744|PDB:3I0K, ECO:0007744|PDB:3I0L, ECO:0007744|PDB:3IOI, ECO:0007744|PDB:3IOJ, ECO:0007744|PDB:3SX3, ECO:0007744|PDB:3SX5, ECO:0007744|PDB:3SX7, ECO:0007744|PDB:3SX8, ECO:0007744|PDB:3SXA, ECO:0007744|PDB:3SXB, ECO:0007744|PDB:3SXC, ECO:0007744|PDB:3SXD, ECO:0007744|PDB:3SXE, ECO:0007744|PDB:3SXG, ECO:0007744|PDB:3U0Y, ECO:0007744|PDB:3V0L, ECO:0007744|PDB:3V0N, ECO:0007744|PDB:3V0Q, ECO:0007744|PDB:3ZGF, ECO:0007744|PDB:3ZGG, ECO:0007744|PDB:4C2S, ECO:0007744|PDB:4FQW, ECO:0007744|PDB:4FRA, ECO:0007744|PDB:4FRB, ECO:0007744|PDB:4FRD, ECO:0007744|PDB:4FRE, ECO:0007744|PDB:4FRH, ECO:0007744|PDB:4FRL, ECO:0007744|PDB:4FRM, ECO:0007744|PDB:4FRO, ECO:0007744|PDB:4FRP, ECO:0007744|PDB:4FRQ, ECO:0007744|PDB:4GBP, ECO:0007744|PDB:4KC1, ECO:0007744|PDB:4KC2, ECO:0007744|PDB:4KC4
|
| source |
Swiss-Prot : SWS_FT_FI2
|
|
|
27)
|
chain |
A |
| residue |
126 |
| type |
BINDING |
| sequence |
Y
|
| description |
BINDING => ECO:0000269|PubMed:12198488, ECO:0000269|PubMed:12972418, ECO:0000269|PubMed:15475562, ECO:0000269|PubMed:16326711, ECO:0000269|PubMed:17259183, ECO:0007744|PDB:1LZI, ECO:0007744|PDB:1LZJ, ECO:0007744|PDB:1R7Y, ECO:0007744|PDB:1R80, ECO:0007744|PDB:1R81, ECO:0007744|PDB:1R82, ECO:0007744|PDB:1WT1, ECO:0007744|PDB:1WT2, ECO:0007744|PDB:1WT3, ECO:0007744|PDB:1ZI5, ECO:0007744|PDB:1ZJ2, ECO:0007744|PDB:1ZJO, ECO:0007744|PDB:1ZJP, ECO:0007744|PDB:2A8U, ECO:0007744|PDB:2A8W, ECO:0007744|PDB:2O1H, ECO:0007744|PDB:2RIX, ECO:0007744|PDB:2RJ0, ECO:0007744|PDB:2RJ1, ECO:0007744|PDB:2RJ4, ECO:0007744|PDB:2RJ5, ECO:0007744|PDB:2RJ7, ECO:0007744|PDB:2RJ8, ECO:0007744|PDB:2RJ9, ECO:0007744|PDB:2Y7A, ECO:0007744|PDB:3I0D, ECO:0007744|PDB:3I0F, ECO:0007744|PDB:3I0G, ECO:0007744|PDB:3I0I, ECO:0007744|PDB:3I0K, ECO:0007744|PDB:3I0L, ECO:0007744|PDB:3IOI, ECO:0007744|PDB:3IOJ, ECO:0007744|PDB:3SX3, ECO:0007744|PDB:3SX5, ECO:0007744|PDB:3SX7, ECO:0007744|PDB:3SX8, ECO:0007744|PDB:3SXA, ECO:0007744|PDB:3SXB, ECO:0007744|PDB:3SXC, ECO:0007744|PDB:3SXD, ECO:0007744|PDB:3SXE, ECO:0007744|PDB:3SXG, ECO:0007744|PDB:3U0Y, ECO:0007744|PDB:3V0L, ECO:0007744|PDB:3V0N, ECO:0007744|PDB:3V0Q, ECO:0007744|PDB:3ZGF, ECO:0007744|PDB:3ZGG, ECO:0007744|PDB:4C2S, ECO:0007744|PDB:4FQW, ECO:0007744|PDB:4FRA, ECO:0007744|PDB:4FRB, ECO:0007744|PDB:4FRD, ECO:0007744|PDB:4FRE, ECO:0007744|PDB:4FRH, ECO:0007744|PDB:4FRL, ECO:0007744|PDB:4FRM, ECO:0007744|PDB:4FRO, ECO:0007744|PDB:4FRP, ECO:0007744|PDB:4FRQ, ECO:0007744|PDB:4GBP, ECO:0007744|PDB:4KC1, ECO:0007744|PDB:4KC2, ECO:0007744|PDB:4KC4
|
| source |
Swiss-Prot : SWS_FT_FI3
|
|
|
28)
|
chain |
A |
| residue |
211 |
| type |
BINDING |
| sequence |
D
|
| description |
BINDING => ECO:0000269|PubMed:12198488, ECO:0000269|PubMed:12972418, ECO:0000269|PubMed:16326711, ECO:0000269|PubMed:17259183, ECO:0007744|PDB:1LZJ, ECO:0007744|PDB:1R80, ECO:0007744|PDB:1ZJ2, ECO:0007744|PDB:1ZJP, ECO:0007744|PDB:2A8U, ECO:0007744|PDB:2O1H, ECO:0007744|PDB:2RIX, ECO:0007744|PDB:2RJ0, ECO:0007744|PDB:2RJ1, ECO:0007744|PDB:2RJ4, ECO:0007744|PDB:2RJ5, ECO:0007744|PDB:2RJ7, ECO:0007744|PDB:2RJ8, ECO:0007744|PDB:2RJ9, ECO:0007744|PDB:3I0F, ECO:0007744|PDB:3IOI, ECO:0007744|PDB:3IOJ, ECO:0007744|PDB:3SX3, ECO:0007744|PDB:3SX5, ECO:0007744|PDB:3SX7, ECO:0007744|PDB:3SXA, ECO:0007744|PDB:3SXB, ECO:0007744|PDB:3SXD, ECO:0007744|PDB:3SXE, ECO:0007744|PDB:3SXG, ECO:0007744|PDB:3U0Y, ECO:0007744|PDB:3V0L, ECO:0007744|PDB:3V0M, ECO:0007744|PDB:3V0N, ECO:0007744|PDB:3V0O, ECO:0007744|PDB:3V0P, ECO:0007744|PDB:3V0Q, ECO:0007744|PDB:3ZGF, ECO:0007744|PDB:3ZGG, ECO:0007744|PDB:4C2S, ECO:0007744|PDB:4FRB, ECO:0007744|PDB:4FRD, ECO:0007744|PDB:4FRH, ECO:0007744|PDB:4FRL, ECO:0007744|PDB:4FRO, ECO:0007744|PDB:4FRP, ECO:0007744|PDB:4FRQ, ECO:0007744|PDB:4GBP
|
| source |
Swiss-Prot : SWS_FT_FI4
|
|
|
29)
|
chain |
A |
| residue |
213 |
| type |
BINDING |
| sequence |
D
|
| description |
BINDING => ECO:0000269|PubMed:12198488, ECO:0000269|PubMed:12972418, ECO:0000269|PubMed:16326711, ECO:0000269|PubMed:17259183, ECO:0007744|PDB:1LZJ, ECO:0007744|PDB:1R80, ECO:0007744|PDB:1ZJ2, ECO:0007744|PDB:1ZJP, ECO:0007744|PDB:2A8U, ECO:0007744|PDB:2O1H, ECO:0007744|PDB:2RIX, ECO:0007744|PDB:2RJ0, ECO:0007744|PDB:2RJ1, ECO:0007744|PDB:2RJ4, ECO:0007744|PDB:2RJ5, ECO:0007744|PDB:2RJ7, ECO:0007744|PDB:2RJ8, ECO:0007744|PDB:2RJ9, ECO:0007744|PDB:3I0F, ECO:0007744|PDB:3IOI, ECO:0007744|PDB:3IOJ, ECO:0007744|PDB:3SX3, ECO:0007744|PDB:3SX5, ECO:0007744|PDB:3SX7, ECO:0007744|PDB:3SXA, ECO:0007744|PDB:3SXB, ECO:0007744|PDB:3SXD, ECO:0007744|PDB:3SXE, ECO:0007744|PDB:3SXG, ECO:0007744|PDB:3U0Y, ECO:0007744|PDB:3V0L, ECO:0007744|PDB:3V0M, ECO:0007744|PDB:3V0N, ECO:0007744|PDB:3V0O, ECO:0007744|PDB:3V0P, ECO:0007744|PDB:3V0Q, ECO:0007744|PDB:3ZGF, ECO:0007744|PDB:3ZGG, ECO:0007744|PDB:4C2S, ECO:0007744|PDB:4FRB, ECO:0007744|PDB:4FRD, ECO:0007744|PDB:4FRH, ECO:0007744|PDB:4FRL, ECO:0007744|PDB:4FRO, ECO:0007744|PDB:4FRP, ECO:0007744|PDB:4FRQ, ECO:0007744|PDB:4GBP
|
| source |
Swiss-Prot : SWS_FT_FI4
|
|
|
30)
|
chain |
A |
| residue |
233 |
| type |
BINDING |
| sequence |
H
|
| description |
BINDING => ECO:0000269|PubMed:16326711, ECO:0007744|PDB:1ZHJ, ECO:0007744|PDB:1ZI3, ECO:0007744|PDB:1ZI4, ECO:0007744|PDB:1ZI5, ECO:0007744|PDB:1ZJ1, ECO:0007744|PDB:1ZJ2, ECO:0007744|PDB:1ZJ3, ECO:0007744|PDB:2A8U, ECO:0007744|PDB:2RJ1, ECO:0007744|PDB:2RJ4, ECO:0007744|PDB:2RJ7, ECO:0007744|PDB:2RJ8, ECO:0007744|PDB:2RJ9, ECO:0007744|PDB:3SX3, ECO:0007744|PDB:3SX7, ECO:0007744|PDB:3SX8, ECO:0007744|PDB:3SXA, ECO:0007744|PDB:3SXG, ECO:0007744|PDB:3V0M, ECO:0007744|PDB:3V0N, ECO:0007744|PDB:3V0O, ECO:0007744|PDB:3V0P, ECO:0007744|PDB:3V0Q, ECO:0007744|PDB:3ZGF, ECO:0007744|PDB:4C2S, ECO:0007744|PDB:4FQW, ECO:0007744|PDB:4FRA, ECO:0007744|PDB:4FRB, ECO:0007744|PDB:4FRD, ECO:0007744|PDB:4FRE, ECO:0007744|PDB:4FRH, ECO:0007744|PDB:4FRL, ECO:0007744|PDB:4FRM, ECO:0007744|PDB:4FRO, ECO:0007744|PDB:4FRP, ECO:0007744|PDB:4FRQ, ECO:0007744|PDB:4GBP, ECO:0007744|PDB:4KC1, ECO:0007744|PDB:4KC2, ECO:0007744|PDB:4KC4
|
| source |
Swiss-Prot : SWS_FT_FI5
|
|
|
31)
|
chain |
A |
| residue |
245 |
| type |
BINDING |
| sequence |
T
|
| description |
BINDING => ECO:0000269|PubMed:12972418, ECO:0000269|PubMed:15475562, ECO:0000269|PubMed:16326711, ECO:0007744|PDB:1R7T, ECO:0007744|PDB:1R7U, ECO:0007744|PDB:1WT2, ECO:0007744|PDB:1ZHJ, ECO:0007744|PDB:1ZI3, ECO:0007744|PDB:1ZI4, ECO:0007744|PDB:1ZI5, ECO:0007744|PDB:1ZIZ, ECO:0007744|PDB:1ZJ0, ECO:0007744|PDB:1ZJ1, ECO:0007744|PDB:1ZJ2, ECO:0007744|PDB:1ZJ3, ECO:0007744|PDB:2A8U, ECO:0007744|PDB:2RIY, ECO:0007744|PDB:2RJ1, ECO:0007744|PDB:2RJ4, ECO:0007744|PDB:2RJ6, ECO:0007744|PDB:2RJ7, ECO:0007744|PDB:2RJ8, ECO:0007744|PDB:2RJ9, ECO:0007744|PDB:3SX3, ECO:0007744|PDB:3SX5, ECO:0007744|PDB:3SX7, ECO:0007744|PDB:3SX8, ECO:0007744|PDB:3SXA, ECO:0007744|PDB:3SXB, ECO:0007744|PDB:3SXC, ECO:0007744|PDB:3SXD, ECO:0007744|PDB:3SXE, ECO:0007744|PDB:3SXG, ECO:0007744|PDB:3V0M, ECO:0007744|PDB:3V0O, ECO:0007744|PDB:3V0P, ECO:0007744|PDB:3V0Q, ECO:0007744|PDB:4C2S, ECO:0007744|PDB:4FQW, ECO:0007744|PDB:4FRA, ECO:0007744|PDB:4FRB, ECO:0007744|PDB:4FRD, ECO:0007744|PDB:4FRE, ECO:0007744|PDB:4FRH, ECO:0007744|PDB:4FRL, ECO:0007744|PDB:4FRM, ECO:0007744|PDB:4FRO, ECO:0007744|PDB:4FRP, ECO:0007744|PDB:4FRQ, ECO:0007744|PDB:4GBP, ECO:0007744|PDB:4KC1, ECO:0007744|PDB:4KC2, ECO:0007744|PDB:4KC4
|
| source |
Swiss-Prot : SWS_FT_FI6
|
|
|
32)
|
chain |
A |
| residue |
326 |
| type |
BINDING |
| sequence |
D
|
| description |
BINDING => ECO:0000269|PubMed:12972418, ECO:0000269|PubMed:16326711, ECO:0007744|PDB:1R7T, ECO:0007744|PDB:1ZI4, ECO:0007744|PDB:1ZI5, ECO:0007744|PDB:1ZJ2, ECO:0007744|PDB:1ZJ3, ECO:0007744|PDB:2RIY, ECO:0007744|PDB:2RJ1, ECO:0007744|PDB:2RJ4, ECO:0007744|PDB:2RJ6, ECO:0007744|PDB:2RJ7, ECO:0007744|PDB:2RJ8, ECO:0007744|PDB:2RJ9, ECO:0007744|PDB:3V0M, ECO:0007744|PDB:3V0O, ECO:0007744|PDB:3V0P, ECO:0007744|PDB:3V0Q, ECO:0007744|PDB:4C2S, ECO:0007744|PDB:4KC1, ECO:0007744|PDB:4KC2, ECO:0007744|PDB:4KC4
|
| source |
Swiss-Prot : SWS_FT_FI8
|
|
|
33)
|
chain |
A |
| residue |
303 |
| type |
BINDING |
| sequence |
E
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| description |
BINDING => ECO:0000269|PubMed:12972418, ECO:0000269|PubMed:15475562, ECO:0000269|PubMed:16326711, ECO:0007744|PDB:1R7T, ECO:0007744|PDB:1R7U, ECO:0007744|PDB:1WT2, ECO:0007744|PDB:1ZHJ, ECO:0007744|PDB:1ZI3, ECO:0007744|PDB:1ZI4, ECO:0007744|PDB:1ZI5, ECO:0007744|PDB:1ZIZ, ECO:0007744|PDB:1ZJ0, ECO:0007744|PDB:1ZJ1, ECO:0007744|PDB:1ZJ2, ECO:0007744|PDB:1ZJ3, ECO:0007744|PDB:2A8U, ECO:0007744|PDB:2RIY, ECO:0007744|PDB:2RJ1, ECO:0007744|PDB:2RJ4, ECO:0007744|PDB:2RJ6, ECO:0007744|PDB:2RJ7, ECO:0007744|PDB:2RJ8, ECO:0007744|PDB:2RJ9, ECO:0007744|PDB:3I0G, ECO:0007744|PDB:3I0L, ECO:0007744|PDB:3IOI, ECO:0007744|PDB:3SX3, ECO:0007744|PDB:3SX5, ECO:0007744|PDB:3SX7, ECO:0007744|PDB:3SX8, ECO:0007744|PDB:3SXA, ECO:0007744|PDB:3SXB, ECO:0007744|PDB:3SXC, ECO:0007744|PDB:3SXD, ECO:0007744|PDB:3SXE, ECO:0007744|PDB:3SXG, ECO:0007744|PDB:3V0L, ECO:0007744|PDB:3V0M, ECO:0007744|PDB:3V0O, ECO:0007744|PDB:3V0P, ECO:0007744|PDB:3V0Q, ECO:0007744|PDB:3ZGG, ECO:0007744|PDB:4C2S, ECO:0007744|PDB:4FQW, ECO:0007744|PDB:4FRA, ECO:0007744|PDB:4FRB, ECO:0007744|PDB:4FRD, ECO:0007744|PDB:4FRE, ECO:0007744|PDB:4FRH, ECO:0007744|PDB:4FRL, ECO:0007744|PDB:4FRM, ECO:0007744|PDB:4FRO, ECO:0007744|PDB:4FRP, ECO:0007744|PDB:4FRQ, ECO:0007744|PDB:4GBP, ECO:0007744|PDB:4KC1, ECO:0007744|PDB:4KC2, ECO:0007744|PDB:4KC4
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Swiss-Prot : SWS_FT_FI7
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