|
|
eF-site ID
|
6gsn-s |
|
PDB Code
|
6gsn |
|
Chain
|
s |
|
click to enlarge
|
|
|
Title
|
Structure of a partial yeast 48S preinitiation complex in closed conformation |
|
Classification
|
RIBOSOME |
|
Compound
|
18S rRNA (1798-MER) |
|
Source
|
ORGANISM_SCIENTIFIC: Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37); ORGANISM_COMMON: Yeast; |
|
|
Sequence
|
s: |
MKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSL
NGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWD
VSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPG
SINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAG
WSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSIS
DMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPL
NTAVITPLKEFIILGGGQGKFEARFYHKIFEEEIGRVQGH
FGPLNTVAISPQGTSYASGGEDGFIRLHHFEKSYFDFKYD
VEKAAEAKEH
|
|
|
Description
|
|
Functional site
|
|
|
1)
|
chain |
s |
| residue |
67-81 |
| type |
prosite |
| sequence |
CVTGSADYSIKLWDV
|
| description |
WD_REPEATS_1 Trp-Asp (WD) repeats signature. CVTGsaDySIKLWDV
|
| source |
prosite : PS00678
|
|
|
2)
|
chain |
s |
| residue |
302 |
| type |
MOD_RES |
| sequence |
S
|
| description |
Phosphoserine => ECO:0007744|PubMed:18407956
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
|