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eF-site ID
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6gsn-g |
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PDB Code
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6gsn |
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Chain
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g |
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click to enlarge
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Title
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Structure of a partial yeast 48S preinitiation complex in closed conformation |
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Classification
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RIBOSOME |
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Compound
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18S rRNA (1798-MER) |
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Source
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ORGANISM_SCIENTIFIC: Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37); ORGANISM_COMMON: Yeast; |
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Sequence
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g: |
SSNIMLVLRGTLEGHNGWVTSLSTSAAQPNLLVSGSRDKT
LISWRLTENEQQFGVPVRSYKGHSHIVQDVVVSADGNYAV
SASWDKTLRLWNLATGNSEARFVGHTGDVLSVAIDANSSK
IISASRDKTIRVWNTVGDCAYVLLGHTDWVTKVRVAPKNL
VDDGRITFVSAGMDKIVRSWSLNSYRIEADFIGHNNYINV
VQPSPDGSLAASAGKDGQIYVWNLKHKSAFMNFDAKDEVF
ALAFSPSRFWLTAATASGIKIYDLENEVLIDELKPEFAGY
TKAQDPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTAN
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Description
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Functional site
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1)
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chain |
g |
| residue |
81-95 |
| type |
prosite |
| sequence |
AVSASWDKTLRLWNL
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| description |
WD_REPEATS_1 Trp-Asp (WD) repeats signature. CVTGsaDySIKLWDV
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| source |
prosite : PS00678
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2)
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chain |
g |
| residue |
123-137 |
| type |
prosite |
| sequence |
IISASRDKTIRVWNT
|
| description |
WD_REPEATS_1 Trp-Asp (WD) repeats signature. CVTGsaDySIKLWDV
|
| source |
prosite : PS00678
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|
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3)
|
chain |
g |
| residue |
218-232 |
| type |
prosite |
| sequence |
AASAGKDGQIYVWNL
|
| description |
WD_REPEATS_1 Trp-Asp (WD) repeats signature. CVTGsaDySIKLWDV
|
| source |
prosite : PS00678
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