|
|
eF-site ID
|
6gsn-a |
|
PDB Code
|
6gsn |
|
Chain
|
a |
|
click to enlarge
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Title
|
Structure of a partial yeast 48S preinitiation complex in closed conformation |
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Classification
|
RIBOSOME |
|
Compound
|
18S rRNA (1798-MER) |
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Source
|
ORGANISM_SCIENTIFIC: Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37); ORGANISM_COMMON: Yeast; |
|
|
Sequence
|
a: |
PKKRASNGRNKKGRGHVKPVRCVNCSRSVPKDKAIKRMAI
RNIVEAAAIRDLSEASVYAEYALPKTYNKLHYCISCAIHA
RIVRVRSRTDRRIRAPPQ
|
|
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Description
|
|
Functional site
|
|
|
1)
|
chain |
a |
| residue |
23 |
| type |
|
| sequence |
C
|
| description |
binding site for residue ZN a 101
|
| source |
: AK9
|
|
|
2)
|
chain |
a |
| residue |
25 |
| type |
|
| sequence |
N
|
| description |
binding site for residue ZN a 101
|
| source |
: AK9
|
|
|
3)
|
chain |
a |
| residue |
26 |
| type |
|
| sequence |
C
|
| description |
binding site for residue ZN a 101
|
| source |
: AK9
|
|
|
4)
|
chain |
a |
| residue |
74 |
| type |
|
| sequence |
C
|
| description |
binding site for residue ZN a 101
|
| source |
: AK9
|
|
|
5)
|
chain |
a |
| residue |
80 |
| type |
|
| sequence |
H
|
| description |
binding site for residue MG a 102
|
| source |
: AL1
|
|
|
6)
|
chain |
a |
| residue |
73-80 |
| type |
prosite |
| sequence |
YCISCAIH
|
| description |
RIBOSOMAL_S26E Ribosomal protein S26e signature. YCISCAIH
|
| source |
prosite : PS00733
|
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|
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