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eF-site ID
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6gsn-C |
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PDB Code
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6gsn |
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Chain
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C |
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click to enlarge
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Title
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Structure of a partial yeast 48S preinitiation complex in closed conformation |
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Classification
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RIBOSOME |
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Compound
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18S rRNA (1798-MER) |
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Source
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ORGANISM_SCIENTIFIC: Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37); ORGANISM_COMMON: Yeast; |
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Sequence
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C: |
GWVPVTKLGRLVKAGKISSIEEIFLHSLPVKEFQIIDQLL
PNLKDEVMNIKPVQKQTRAGQRTRFKAVVVVGDSNGHVGL
GIKTAKEVAGAIRAGIIIAKLSVIPIRRGYWGTNLGQPHS
LATKTSGKCGSVSVRLIPAPRGSGIVASPAVKKLMQLAGV
EDVYTSSTGSTRTLENTLKAAFVAIGNTYGFLTPNLWEVQ
ALTPSPMDVYADYATAS
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Description
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Functional site
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1)
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chain |
C |
| residue |
121 |
| type |
|
| sequence |
K
|
| description |
binding site for residue MG C 301
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| source |
: AK1
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2)
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chain |
C |
| residue |
98-130 |
| type |
prosite |
| sequence |
GQRTRFKAVVVVGDSNGHVGLGIKTAKEVAGAI
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| description |
RIBOSOMAL_S5 Ribosomal protein S5 signature. GQrtrFkAvvVVGDsn.GhVGlGiktak.EVag.AI
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| source |
prosite : PS00585
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