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eF-site ID
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6gsn-B |
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PDB Code
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6gsn |
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Chain
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B |
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click to enlarge
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Title
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Structure of a partial yeast 48S preinitiation complex in closed conformation |
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Classification
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RIBOSOME |
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Compound
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18S rRNA (1798-MER) |
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Source
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ORGANISM_SCIENTIFIC: Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37); ORGANISM_COMMON: Yeast; |
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Sequence
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B: |
VGKNKRLRVVDPFTRKEWYDIKAPSTFENRNVGKTLVNKS
VGLKNASDSLKGRVVEVCLADLQGSEDHSFRKVKLRVDEV
QGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSD
DYVLRIFAIAFTRKQANQVKRTSYAQSSHIRQIRKVISEI
LTREVQNSTLAQLTSKLIPEVINKEIENATKDIFPLQNVH
IRKVKLLKQPKFDLGSLLSLHG
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Description
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Functional site
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1)
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chain |
B |
| residue |
157 |
| type |
|
| sequence |
Q
|
| description |
binding site for residue MG B 301
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| source |
: AK8
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2)
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chain |
B |
| residue |
61-73 |
| type |
prosite |
| sequence |
LKGRVVEVCLADL
|
| description |
RIBOSOMAL_S3AE Ribosomal protein S3Ae signature. LkGRVvEvCLaDL
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| source |
prosite : PS01191
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