eF-site ID 6gs3-AB
PDB Code 6gs3
Chain A, B

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Title Crystal Structure of the Uperin-3.5 peptide from Uperoleia mjobergii forming cross-alpha fibril
Classification PROTEIN FIBRIL
Compound Uperin-3.5
Source (UPE35_UPEMJ)
Sequence A:  GVGDLIRKAVSVIKNIV
B:  GVGDLIRKAVSVIKNIV
Description (1)  Uperin-3.5


Functional site

1) chain A
residue 11
type
sequence S
description binding site for residue SCN A 101
source : AC1

2) chain A
residue 14
type
sequence K
description binding site for residue SCN A 101
source : AC1

3) chain B
residue 11
type
sequence S
description binding site for residue SCN A 101
source : AC1

4) chain A
residue 7
type
sequence R
description binding site for residue K B 101
source : AC2

5) chain B
residue 14
type
sequence K
description binding site for residue K B 101
source : AC2

6) chain B
residue 17
type
sequence V
description binding site for residue K B 101
source : AC2

7) chain A
residue 15
type
sequence N
description binding site for residue K B 102
source : AC3

8) chain B
residue 4
type
sequence D
description binding site for residue K B 102
source : AC3

9) chain B
residue 7
type
sequence R
description binding site for residue K B 102
source : AC3

10) chain A
residue 7
type SITE
sequence R
description Involved in inter-helical interactions along the fibril => ECO:0000269|PubMed:33431675
source Swiss-Prot : SWS_FT_FI1

11) chain B
residue 7
type SITE
sequence R
description Involved in inter-helical interactions along the fibril => ECO:0000269|PubMed:33431675
source Swiss-Prot : SWS_FT_FI1

12) chain A
residue 17
type MOD_RES
sequence V
description Valine amide => ECO:0000269|Ref.1
source Swiss-Prot : SWS_FT_FI2

13) chain B
residue 17
type MOD_RES
sequence V
description Valine amide => ECO:0000269|Ref.1
source Swiss-Prot : SWS_FT_FI2


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