eF-site ID 6gml-I PDB Code 6gml Chain I click to enlarge Title Structure of paused transcription complex Pol II-DSIF-NELF Classification TRANSCRIPTION Compound DNA-directed RNA polymerase subunit Source ORGANISM_COMMON: Pig; ORGANISM_SCIENTIFIC: Sus scrofa; Sequence I:  PGFVGIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEA DNSCIYVNKITHEVDELTQIIADVSQDPTLPRTEDHPCQK CGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRWTE Description Functional site 1) chain I residue 17 type sequence C description binding site for residue ZN I 200 source : AC6 2) chain I residue 20 type sequence C description binding site for residue ZN I 200 source : AC6 3) chain I residue 39 type sequence C description binding site for residue ZN I 200 source : AC6 4) chain I residue 42 type sequence C description binding site for residue ZN I 200 source : AC6 5) chain I residue 86 type sequence C description binding site for residue ZN I 201 source : AC7 6) chain I residue 89 type sequence C description binding site for residue ZN I 201 source : AC7 7) chain I residue 114 type sequence C description binding site for residue ZN I 201 source : AC7 8) chain I residue 119 type sequence C description binding site for residue ZN I 201 source : AC7 9) chain I residue 121 type sequence H description binding site for residue ZN I 201 source : AC7 10) chain I residue 112-118 type prosite sequence YVCTAPH description IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YVCTAPH source prosite : PS00290 11) chain I residue 86-123 type prosite sequence CQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRW description ZF_TFIIS_1 Zinc finger TFIIS-type signature. CqkCghkeavffqSHSARaEDAmrlyyvCtaph.CghrW source prosite : PS00466 12) chain I residue 16-42 type prosite sequence FCQECNNMLYPKEDKENRILLYACRNC description RNA_POL_M_15KD RNA polymerases M / 15 Kd subunits signature. FCQECNNMLypkedkenrillyaCrnC source prosite : PS01030 13) chain I residue 20 type MOD_RES sequence C description Phosphoserine => ECO:0007744|PubMed:17081983, ECO:0007744|PubMed:18669648, ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:23186163 source Swiss-Prot : SWS_FT_FI3 14) chain I residue 39 type MOD_RES sequence C description Phosphoserine => ECO:0007744|PubMed:17081983, ECO:0007744|PubMed:18669648, ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:23186163 source Swiss-Prot : SWS_FT_FI3 15) chain I residue 42 type MOD_RES sequence C description Phosphoserine => ECO:0007744|PubMed:17081983, ECO:0007744|PubMed:18669648, ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:23186163 source Swiss-Prot : SWS_FT_FI3

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