eF-site ID 6gml-C PDB Code 6gml Chain C click to enlarge Title Structure of paused transcription complex Pol II-DSIF-NELF Classification TRANSCRIPTION Compound DNA-directed RNA polymerase subunit Source ORGANISM_COMMON: Pig; ORGANISM_SCIENTIFIC: Sus scrofa; Sequence C:  PYANQPTVRITELTDENVKFIIENTDLAVANSIRRVFIAE VPIIAIDWVQIDANSSVLHDEFIAHRLGLIPLTSDDIVDK LQYSRDCTCEEFCPECSVEFTLDVRCNEDQTRHVTSRDLI SNSPRVIPVTEQDDILIVKLRKGQELRLRAYAKKGFGKEH AKWNPTAGVAFEYDPDNALRHTVYPKPEEWPKSEYSELDE DESQAPYDPNGKPERFYYNVESCGSLRPETIVLSALSGLK KKLSDLQTQLSHEIQSDV Description (1)  DNA-directed RNA polymerase subunit, DNA-directed RNA polymerase subunit beta, RNA polymerase II subunit C, RNA polymerase II subunit E, RNA polymerase II subunit F, DNA-directed RNA polymerases I, II, and III subunit RPABC3, DNA-directed RNA polymerase II subunit RPB9, Uncharacterized protein, Negative elongation factor A, Negative elongation factor B, Negative elongation factor C/D, Negative elongation factor E, Transcription elongation factor SPT4, Transcription elongation factor SPT5, RNA polymerase II subunit D, RNA polymerase II subunit G/DNA Complex Functional site 1) chain C residue 88 type sequence C description binding site for residue ZN C 401 source : AC5 2) chain C residue 90 type sequence C description binding site for residue ZN C 401 source : AC5 3) chain C residue 94 type sequence C description binding site for residue ZN C 401 source : AC5 4) chain C residue 97 type sequence C description binding site for residue ZN C 401 source : AC5 5) chain C residue 32-72 type prosite sequence NSIRRVFIAEVPIIAIDWVQIDANSSVLHDEFIAHRLGLI P description RNA_POL_D_30KD RNA polymerases D / 30 to 40 Kd subunits signature. NSIRRvfiaevpiiAidwVqidaNsSvlhDEfIAhRLGLIP source prosite : PS00446

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