eF-site ID 6gmc-A
PDB Code 6gmc
Chain A

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Title 1.2 A resolution structure of human hydroxyacid oxidase 1 bound with FMN and 4-carboxy-5-[(4-chlorophenyl)sulfanyl]-1,2,3-thiadiazole
Classification OXIDOREDUCTASE
Compound Hydroxyacid oxidase 1
Source (HAOX1_HUMAN)
Sequence A:  MLPRLICINDYEQHAKSVLPKSIYDYYRSGANDEETLADN
IAAFSRWKLYPRMLRNVAETDLSTSVLGQRVSMPICVGAT
AMQRMAHVDGELATVRACQSLGTGMMLSSWATSSIEEVAE
AGPEALRWLQLYIYKDREVTKKLVRQAEKMGYKAIFVTVD
TPYLGNRLDDVRNRFKLPPQLRMKNFSTLSFSPEENFGDD
SGLAAYVAKAIDPSISWEDIKWLRRLTSLPIVAKGILRGD
DAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAV
EGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIVWGLA
FQGEKGVQDVLEILKEEFRLAMALSGCQNVKVIDKTLVRK
Description


Functional site

1) chain A
residue 52
type
sequence R
description binding site for residue EDO A 501
source : AC1

2) chain A
residue 53
type
sequence M
description binding site for residue EDO A 501
source : AC1

3) chain A
residue 54
type
sequence L
description binding site for residue EDO A 501
source : AC1

4) chain A
residue 55
type
sequence R
description binding site for residue EDO A 501
source : AC1

5) chain A
residue 159
type
sequence V
description binding site for residue EDO A 501
source : AC1

6) chain A
residue 345
type
sequence A
description binding site for residue EDO A 501
source : AC1

7) chain A
residue 348
type
sequence G
description binding site for residue EDO A 501
source : AC1

8) chain A
residue 284
type
sequence G
description binding site for residue EDO A 502
source : AC2

9) chain A
residue 285
type
sequence K
description binding site for residue EDO A 502
source : AC2

10) chain A
residue 286
type
sequence V
description binding site for residue EDO A 502
source : AC2

11) chain A
residue 287
type
sequence E
description binding site for residue EDO A 502
source : AC2

12) chain A
residue 323
type
sequence F
description binding site for residue EDO A 502
source : AC2

13) chain A
residue 324
type
sequence Q
description binding site for residue EDO A 502
source : AC2

14) chain A
residue 327
type
sequence K
description binding site for residue EDO A 502
source : AC2

15) chain A
residue 28
type
sequence R
description binding site for residue EDO A 503
source : AC3

16) chain A
residue 37
type
sequence L
description binding site for residue EDO A 503
source : AC3

17) chain A
residue 7
type
sequence C
description binding site for residue EDO A 504
source : AC4

18) chain A
residue 32
type
sequence N
description binding site for residue EDO A 504
source : AC4

19) chain A
residue 33
type
sequence D
description binding site for residue EDO A 504
source : AC4

20) chain A
residue 168
type
sequence L
description binding site for residue EDO A 504
source : AC4

21) chain A
residue 296
type
sequence K
description binding site for residue EDO A 504
source : AC4

22) chain A
residue 339
type
sequence E
description binding site for residue EDO A 504
source : AC4

23) chain A
residue 26
type
sequence Y
description binding site for residue FMN A 505
source : AC5

24) chain A
residue 27
type
sequence Y
description binding site for residue FMN A 505
source : AC5

25) chain A
residue 79
type
sequence A
description binding site for residue FMN A 505
source : AC5

26) chain A
residue 80
type
sequence T
description binding site for residue FMN A 505
source : AC5

27) chain A
residue 81
type
sequence A
description binding site for residue FMN A 505
source : AC5

28) chain A
residue 108
type
sequence S
description binding site for residue FMN A 505
source : AC5

29) chain A
residue 109
type
sequence S
description binding site for residue FMN A 505
source : AC5

30) chain A
residue 110
type
sequence W
description binding site for residue FMN A 505
source : AC5

31) chain A
residue 130
type
sequence Q
description binding site for residue FMN A 505
source : AC5

32) chain A
residue 132
type
sequence Y
description binding site for residue FMN A 505
source : AC5

33) chain A
residue 158
type
sequence T
description binding site for residue FMN A 505
source : AC5

34) chain A
residue 236
type
sequence K
description binding site for residue FMN A 505
source : AC5

35) chain A
residue 258
type
sequence S
description binding site for residue FMN A 505
source : AC5

36) chain A
residue 260
type
sequence H
description binding site for residue FMN A 505
source : AC5

37) chain A
residue 261
type
sequence G
description binding site for residue FMN A 505
source : AC5

38) chain A
residue 263
type
sequence R
description binding site for residue FMN A 505
source : AC5

39) chain A
residue 291
type
sequence D
description binding site for residue FMN A 505
source : AC5

40) chain A
residue 292
type
sequence G
description binding site for residue FMN A 505
source : AC5

41) chain A
residue 293
type
sequence G
description binding site for residue FMN A 505
source : AC5

42) chain A
residue 295
type
sequence R
description binding site for residue FMN A 505
source : AC5

43) chain A
residue 314
type
sequence G
description binding site for residue FMN A 505
source : AC5

44) chain A
residue 315
type
sequence R
description binding site for residue FMN A 505
source : AC5

45) chain A
residue 26
type
sequence Y
description binding site for residue C7C A 506
source : AC6

46) chain A
residue 82
type
sequence M
description binding site for residue C7C A 506
source : AC6

47) chain A
residue 110
type
sequence W
description binding site for residue C7C A 506
source : AC6

48) chain A
residue 132
type
sequence Y
description binding site for residue C7C A 506
source : AC6

49) chain A
residue 167
type
sequence R
description binding site for residue C7C A 506
source : AC6

50) chain A
residue 183
type
sequence M
description binding site for residue C7C A 506
source : AC6

51) chain A
residue 193
type
sequence F
description binding site for residue C7C A 506
source : AC6

52) chain A
residue 205
type
sequence L
description binding site for residue C7C A 506
source : AC6

53) chain A
residue 208
type
sequence Y
description binding site for residue C7C A 506
source : AC6

54) chain A
residue 260
type
sequence H
description binding site for residue C7C A 506
source : AC6

55) chain A
residue 263
type
sequence R
description binding site for residue C7C A 506
source : AC6

56) chain A
residue 260
type ACT_SITE
sequence H
description Proton acceptor => ECO:0000255|PROSITE-ProRule:PRU00683
source Swiss-Prot : SWS_FT_FI1

57) chain A
residue 184
type MOD_RES
sequence K
description N6-succinyllysine => ECO:0000250|UniProtKB:Q9WU19
source Swiss-Prot : SWS_FT_FI8

58) chain A
residue 230
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:24275569
source Swiss-Prot : SWS_FT_FI10

59) chain A
residue 194
type MOD_RES
sequence S
description Phosphoserine => ECO:0000250|UniProtKB:Q9WU19
source Swiss-Prot : SWS_FT_FI9

60) chain A
residue 26
type BINDING
sequence Y
description BINDING => ECO:0000269|PubMed:18215067, ECO:0007744|PDB:2NZL, ECO:0007744|PDB:2RDU
source Swiss-Prot : SWS_FT_FI2

61) chain A
residue 132
type BINDING
sequence Y
description BINDING => ECO:0000269|PubMed:18215067, ECO:0007744|PDB:2NZL, ECO:0007744|PDB:2RDU
source Swiss-Prot : SWS_FT_FI2

62) chain A
residue 260
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:18215067, ECO:0007744|PDB:2NZL, ECO:0007744|PDB:2RDU
source Swiss-Prot : SWS_FT_FI2

63) chain A
residue 263
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:18215067, ECO:0007744|PDB:2NZL, ECO:0007744|PDB:2RDU
source Swiss-Prot : SWS_FT_FI2

64) chain A
residue 79
type BINDING
sequence A
description BINDING => ECO:0000269|PubMed:18215067, ECO:0000269|PubMed:20054120, ECO:0007744|PDB:2RDT, ECO:0007744|PDB:2RDU, ECO:0007744|PDB:2RDW, ECO:0007744|PDB:2W0U
source Swiss-Prot : SWS_FT_FI3

65) chain A
residue 108
type BINDING
sequence S
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00683, ECO:0000269|PubMed:18215067, ECO:0000269|PubMed:20054120, ECO:0000269|Ref.11, ECO:0007744|PDB:2NZL, ECO:0007744|PDB:2RDT, ECO:0007744|PDB:2RDU, ECO:0007744|PDB:2RDW, ECO:0007744|PDB:2W0U
source Swiss-Prot : SWS_FT_FI4

66) chain A
residue 158
type BINDING
sequence T
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00683, ECO:0000269|PubMed:18215067, ECO:0000269|PubMed:20054120, ECO:0000269|Ref.11, ECO:0007744|PDB:2NZL, ECO:0007744|PDB:2RDT, ECO:0007744|PDB:2RDU, ECO:0007744|PDB:2RDW, ECO:0007744|PDB:2W0U
source Swiss-Prot : SWS_FT_FI4

67) chain A
residue 236
type BINDING
sequence K
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00683, ECO:0000269|PubMed:18215067, ECO:0000269|PubMed:20054120, ECO:0000269|Ref.11, ECO:0007744|PDB:2NZL, ECO:0007744|PDB:2RDT, ECO:0007744|PDB:2RDU, ECO:0007744|PDB:2RDW, ECO:0007744|PDB:2W0U
source Swiss-Prot : SWS_FT_FI4

68) chain A
residue 258-264
type prosite
sequence SNHGARQ
description FMN_HYDROXY_ACID_DH_1 FMN-dependent alpha-hydroxy acid dehydrogenases active site. SNHGARQ
source prosite : PS00557

69) chain A
residue 130
type BINDING
sequence Q
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00683, ECO:0000269|PubMed:18215067, ECO:0000269|PubMed:20054120, ECO:0007744|PDB:2RDT, ECO:0007744|PDB:2RDU, ECO:0007744|PDB:2W0U
source Swiss-Prot : SWS_FT_FI5

70) chain A
residue 167
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:18215067, ECO:0000269|Ref.11, ECO:0007744|PDB:2NZL, ECO:0007744|PDB:2RDU
source Swiss-Prot : SWS_FT_FI6

71) chain A
residue 258
type BINDING
sequence S
description BINDING => ECO:0000269|PubMed:18215067, ECO:0000269|PubMed:20054120, ECO:0000269|Ref.11, ECO:0007744|PDB:2NZL, ECO:0007744|PDB:2RDT, ECO:0007744|PDB:2RDU, ECO:0007744|PDB:2RDW, ECO:0007744|PDB:2W0U
source Swiss-Prot : SWS_FT_FI7

72) chain A
residue 291
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:18215067, ECO:0000269|PubMed:20054120, ECO:0000269|Ref.11, ECO:0007744|PDB:2NZL, ECO:0007744|PDB:2RDT, ECO:0007744|PDB:2RDU, ECO:0007744|PDB:2RDW, ECO:0007744|PDB:2W0U
source Swiss-Prot : SWS_FT_FI7

73) chain A
residue 314
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:18215067, ECO:0000269|PubMed:20054120, ECO:0000269|Ref.11, ECO:0007744|PDB:2NZL, ECO:0007744|PDB:2RDT, ECO:0007744|PDB:2RDU, ECO:0007744|PDB:2RDW, ECO:0007744|PDB:2W0U
source Swiss-Prot : SWS_FT_FI7


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