eF-site ID 6glc-A
PDB Code 6glc
Chain A

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Title Structure of phospho-Parkin bound to phospho-ubiquitin
Classification LIGASE
Compound E3 ubiquitin-protein ligase parkin
Source (UBB_HUMAN)
Sequence A:  PMIVFVRFNSSHGFPVEVDSDTSIFQLKEVVAKRQGVPAD
QLRVIFAGKELRNDWTVQNCDLDQQXIVHIVQRQSLTRVD
LSYNSFYVYCKGPCQRVQPGKLRVQCSTCRQATLTLTQGP
SCWDDVLIPNRMSGECQSPHCPGTSAEFFFKCGAHPTSDK
ETSVALHLIATNSRNITCITCTDVRSPVLVFQCNSRHVIC
LDCFHLYCVTRLNDRQFVHDPQLGYSLPCVAGCPNSLIKE
LHHFRILGEEQYNRYQQYGAEECVLQMGGVLCPRPGCGAG
LLPEPDCRKVTCENGLGCGFAFCRECKEAYHEGECS
Description


Functional site

1) chain A
residue 253
type
sequence C
description binding site for residue ZN A 501
source : AC1

2) chain A
residue 257
type
sequence H
description binding site for residue ZN A 501
source : AC1

3) chain A
residue 289
type
sequence C
description binding site for residue ZN A 501
source : AC1

4) chain A
residue 293
type
sequence C
description binding site for residue ZN A 501
source : AC1

5) chain A
residue 365
type
sequence C
description binding site for residue ZN A 502
source : AC2

6) chain A
residue 368
type
sequence C
description binding site for residue ZN A 502
source : AC2

7) chain A
residue 373
type
sequence H
description binding site for residue ZN A 502
source : AC2

8) chain A
residue 377
type
sequence C
description binding site for residue ZN A 502
source : AC2

9) chain A
residue 166
type
sequence C
description binding site for residue ZN A 503
source : AC3

10) chain A
residue 169
type
sequence C
description binding site for residue ZN A 503
source : AC3

11) chain A
residue 196
type
sequence C
description binding site for residue ZN A 503
source : AC3

12) chain A
residue 201
type
sequence C
description binding site for residue ZN A 503
source : AC3

13) chain A
residue 238
type
sequence C
description binding site for residue ZN A 504
source : AC4

14) chain A
residue 241
type
sequence C
description binding site for residue ZN A 504
source : AC4

15) chain A
residue 260
type
sequence C
description binding site for residue ZN A 504
source : AC4

16) chain A
residue 263
type
sequence C
description binding site for residue ZN A 504
source : AC4

17) chain A
residue 332
type
sequence C
description binding site for residue ZN A 505
source : AC5

18) chain A
residue 337
type
sequence C
description binding site for residue ZN A 505
source : AC5

19) chain A
residue 352
type
sequence C
description binding site for residue ZN A 505
source : AC5

20) chain A
residue 360
type
sequence C
description binding site for residue ZN A 505
source : AC5

21) chain A
residue 150
type
sequence C
description binding site for residue ZN A 506
source : AC6

22) chain A
residue 154
type
sequence C
description binding site for residue ZN A 506
source : AC6

23) chain A
residue 212
type
sequence C
description binding site for residue ZN A 506
source : AC6

24) chain A
residue 215
type
sequence H
description binding site for residue ZN A 506
source : AC6

25) chain A
residue 14
type
sequence P
description binding site for residue GOL A 507
source : AC7

26) chain A
residue 16
type
sequence E
description binding site for residue GOL A 507
source : AC7

27) chain A
residue 263
type
sequence C
description binding site for residue GOL A 507
source : AC7

28) chain A
residue 14
type
sequence P
description binding site for residue GOL A 508
source : AC8

29) chain A
residue 245
type
sequence R
description binding site for residue GOL A 508
source : AC8

30) chain A
residue 263
type
sequence C
description binding site for residue GOL A 508
source : AC8

31) chain A
residue 4
type
sequence F
description binding site for residue GOL A 509
source : AC9

32) chain A
residue 12
type
sequence G
description binding site for residue GOL A 509
source : AC9

33) chain A
residue 66
type
sequence I
description binding site for residue GOL A 509
source : AC9

34) chain A
residue 218
type
sequence S
description binding site for residue GOL A 509
source : AC9

35) chain A
residue 242
type
sequence T
description binding site for residue GOL A 509
source : AC9

36) chain A
residue 299
type
sequence K
description binding site for residue MPD A 510
source : AD1

37) chain A
residue 300
type
sequence E
description binding site for residue MPD A 510
source : AD1

38) chain A
residue 301
type
sequence L
description binding site for residue MPD A 510
source : AD1

39) chain A
residue 302
type
sequence H
description binding site for residue MPD A 510
source : AD1

40) chain A
residue 241
type MOD_RES
sequence C
description (Microbial infection) ADP-ribosylthreonine => ECO:0000269|PubMed:32330457
source Swiss-Prot : SWS_FT_FI4

41) chain A
residue 260
type MOD_RES
sequence C
description (Microbial infection) ADP-ribosylthreonine => ECO:0000269|PubMed:32330457
source Swiss-Prot : SWS_FT_FI4

42) chain A
residue 263
type MOD_RES
sequence C
description (Microbial infection) ADP-ribosylthreonine => ECO:0000269|PubMed:32330457
source Swiss-Prot : SWS_FT_FI4

43) chain A
residue 289
type MOD_RES
sequence C
description (Microbial infection) ADP-ribosylthreonine => ECO:0000269|PubMed:32330457
source Swiss-Prot : SWS_FT_FI4

44) chain A
residue 293
type MOD_RES
sequence C
description (Microbial infection) ADP-ribosylthreonine => ECO:0000269|PubMed:32330457
source Swiss-Prot : SWS_FT_FI4

45) chain A
residue 373
type MOD_RES
sequence H
description (Microbial infection) ADP-ribosylthreonine => ECO:0000269|PubMed:32330457
source Swiss-Prot : SWS_FT_FI4

46) chain A
residue 253
type MOD_RES
sequence C
description (Microbial infection) ADP-ribosylthreonine => ECO:0000269|PubMed:32330457
source Swiss-Prot : SWS_FT_FI4

47) chain A
residue 257
type MOD_RES
sequence H
description (Microbial infection) ADP-ribosylthreonine => ECO:0000269|PubMed:32330457
source Swiss-Prot : SWS_FT_FI4

48) chain A
residue 360
type MOD_RES
sequence C
description ADP-ribosylglycine => ECO:0000269|PubMed:28525742
source Swiss-Prot : SWS_FT_FI5

49) chain A
residue 365
type MOD_RES
sequence C
description ADP-ribosylglycine => ECO:0000269|PubMed:28525742
source Swiss-Prot : SWS_FT_FI5

50) chain A
residue 368
type MOD_RES
sequence C
description ADP-ribosylglycine => ECO:0000269|PubMed:28525742
source Swiss-Prot : SWS_FT_FI5

51) chain A
residue 377
type MOD_RES
sequence C
description ADP-ribosylglycine => ECO:0000269|PubMed:28525742
source Swiss-Prot : SWS_FT_FI5

52) chain A
residue 337
type MOD_RES
sequence C
description ADP-ribosylglycine => ECO:0000269|PubMed:28525742
source Swiss-Prot : SWS_FT_FI5

53) chain A
residue 352
type MOD_RES
sequence C
description ADP-ribosylglycine => ECO:0000269|PubMed:28525742
source Swiss-Prot : SWS_FT_FI5

54) chain A
residue 175
type CROSSLNK
sequence T
description Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins)
source Swiss-Prot : SWS_FT_FI7

55) chain A
residue 369
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000305|PubMed:15466860
source Swiss-Prot : SWS_FT_FI9


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