eF-site ID 6ghk-AB
PDB Code 6ghk
Chain A, B

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Title Human PARP1 (ARTD1) - Catalytic domain in complex with inhibitor ME0527
Classification TRANSFERASE
Compound Poly [ADP-ribose] polymerase 1
Source (PARP1_HUMAN)
Sequence A:  MKSKLPKPVQDLIKMIFDVESMKKAMVEYEIDLQKMPLGK
LSKRQIQAAYSILSEVQQAVSQGSSDSQILDLSNRFYTLI
PHDFGMKKPPLLNNADSVQAKAEMLDNLLDIEVAYSLLRG
GSSSKDPIDVNYEKLKTDIKVVDRDSEEAEIIRKYVKNTH
ANAYDLEVIDIFKIEREGECQRYKPFKQLHNRRLLWHGSR
TTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSA
NYCHTSQGDPIGLILLGEVALGNMYELKHASHISKLPKGK
HSVKGLGKTTPDPSANISLDGVDVPLGTGISSGVNDTSLL
YNEYIVYDIAQVNLKYLLKLKFNFKTAHHH
B:  MKSKLPKPVQDLIKMIFDVESMKKAMVEYEIDLQKMPLGK
LSKRQIQAAYSILSEVQQAVSQGSSDSQILDLSNRFYTLI
PHDFGMKKPPLLNNADSVQAKAEMLDNLLDIEVAYSLLRG
GSSSKDPIDVNYEKLKTDIKVVDRDSEEAEIIRKYVKNTH
ATTHNAYDLEVIDIFKIEREGECQRYKPFKQLHNRRLLWH
GSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVS
KSANYCHTSQGDPIGLILLGEVALGNMYELKHASHISKLP
KGKHSVKGLGKTTPDPSANISLDGVDVPLGTGISSGVNDT
SLLYNEYIVYDIAQVNLKYLLKLKFNFKTAHHHHH
Description


Functional site

1) chain A
residue 710
type
sequence Y
description binding site for residue EZ2 A 1101
source : AC1

2) chain A
residue 766
type
sequence D
description binding site for residue EZ2 A 1101
source : AC1

3) chain A
residue 769
type
sequence L
description binding site for residue EZ2 A 1101
source : AC1

4) chain A
residue 862
type
sequence H
description binding site for residue EZ2 A 1101
source : AC1

5) chain A
residue 863
type
sequence G
description binding site for residue EZ2 A 1101
source : AC1

6) chain A
residue 878
type
sequence R
description binding site for residue EZ2 A 1101
source : AC1

7) chain A
residue 879
type
sequence I
description binding site for residue EZ2 A 1101
source : AC1

8) chain A
residue 880
type
sequence A
description binding site for residue EZ2 A 1101
source : AC1

9) chain A
residue 889
type
sequence Y
description binding site for residue EZ2 A 1101
source : AC1

10) chain A
residue 894
type
sequence G
description binding site for residue EZ2 A 1101
source : AC1

11) chain A
residue 896
type
sequence Y
description binding site for residue EZ2 A 1101
source : AC1

12) chain A
residue 897
type
sequence F
description binding site for residue EZ2 A 1101
source : AC1

13) chain A
residue 904
type
sequence S
description binding site for residue EZ2 A 1101
source : AC1

14) chain A
residue 907
type
sequence Y
description binding site for residue EZ2 A 1101
source : AC1

15) chain A
residue 988
type
sequence E
description binding site for residue EZ2 A 1101
source : AC1

16) chain A
residue 702
type
sequence S
description binding site for residue SO4 A 1102
source : AC2

17) chain A
residue 703
type
sequence K
description binding site for residue SO4 A 1102
source : AC2

18) chain A
residue 704
type
sequence R
description binding site for residue SO4 A 1102
source : AC2

19) chain B
residue 798
type
sequence K
description binding site for residue SO4 A 1102
source : AC2

20) chain B
residue 875
type
sequence Q
description binding site for residue SO4 A 1102
source : AC2

21) chain A
residue 865
type
sequence R
description binding site for residue SO4 A 1103
source : AC3

22) chain A
residue 906
type
sequence N
description binding site for residue SO4 A 1103
source : AC3

23) chain A
residue 909
type
sequence H
description binding site for residue SO4 A 1103
source : AC3

24) chain B
residue 1012
type
sequence A
description binding site for residue SO4 A 1103
source : AC3

25) chain B
residue 1013
type
sequence H
description binding site for residue SO4 A 1103
source : AC3

26) chain A
residue 1012
type
sequence A
description binding site for residue SO4 A 1104
source : AC4

27) chain A
residue 1013
type
sequence H
description binding site for residue SO4 A 1104
source : AC4

28) chain B
residue 865
type
sequence R
description binding site for residue SO4 A 1104
source : AC4

29) chain B
residue 906
type
sequence N
description binding site for residue SO4 A 1104
source : AC4

30) chain B
residue 909
type
sequence H
description binding site for residue SO4 A 1104
source : AC4

31) chain A
residue 903
type
sequence K
description binding site for residue SO4 A 1105
source : AC5

32) chain A
residue 984
type
sequence L
description binding site for residue SO4 A 1105
source : AC5

33) chain A
residue 985
type
sequence L
description binding site for residue SO4 A 1105
source : AC5

34) chain A
residue 986
type
sequence Y
description binding site for residue SO4 A 1105
source : AC5

35) chain B
residue 1014
type
sequence H
description binding site for residue SO4 A 1105
source : AC5

36) chain B
residue 1016
type
sequence H
description binding site for residue SO4 A 1105
source : AC5

37) chain B
residue 710
type
sequence Y
description binding site for residue EZ2 B 1101
source : AC6

38) chain B
residue 766
type
sequence D
description binding site for residue EZ2 B 1101
source : AC6

39) chain B
residue 862
type
sequence H
description binding site for residue EZ2 B 1101
source : AC6

40) chain B
residue 863
type
sequence G
description binding site for residue EZ2 B 1101
source : AC6

41) chain B
residue 878
type
sequence R
description binding site for residue EZ2 B 1101
source : AC6

42) chain B
residue 880
type
sequence A
description binding site for residue EZ2 B 1101
source : AC6

43) chain B
residue 881
type
sequence P
description binding site for residue EZ2 B 1101
source : AC6

44) chain B
residue 889
type
sequence Y
description binding site for residue EZ2 B 1101
source : AC6

45) chain B
residue 894
type
sequence G
description binding site for residue EZ2 B 1101
source : AC6

46) chain B
residue 896
type
sequence Y
description binding site for residue EZ2 B 1101
source : AC6

47) chain B
residue 897
type
sequence F
description binding site for residue EZ2 B 1101
source : AC6

48) chain B
residue 904
type
sequence S
description binding site for residue EZ2 B 1101
source : AC6

49) chain B
residue 907
type
sequence Y
description binding site for residue EZ2 B 1101
source : AC6

50) chain B
residue 988
type
sequence E
description binding site for residue EZ2 B 1101
source : AC6

51) chain A
residue 798
type
sequence K
description binding site for residue SO4 B 1102
source : AC7

52) chain A
residue 875
type
sequence Q
description binding site for residue SO4 B 1102
source : AC7

53) chain B
residue 702
type
sequence S
description binding site for residue SO4 B 1102
source : AC7

54) chain B
residue 703
type
sequence K
description binding site for residue SO4 B 1102
source : AC7

55) chain B
residue 704
type
sequence R
description binding site for residue SO4 B 1102
source : AC7

56) chain A
residue 1014
type
sequence H
description binding site for residue SO4 B 1103
source : AC8

57) chain B
residue 903
type
sequence K
description binding site for residue SO4 B 1103
source : AC8

58) chain B
residue 984
type
sequence L
description binding site for residue SO4 B 1103
source : AC8

59) chain B
residue 985
type
sequence L
description binding site for residue SO4 B 1103
source : AC8

60) chain B
residue 986
type
sequence Y
description binding site for residue SO4 B 1103
source : AC8

61) chain A
residue 988
type ACT_SITE
sequence E
description For poly [ADP-ribose] polymerase activity => ECO:0000305|PubMed:32028527, ECO:0000305|PubMed:7852410, ECO:0000305|PubMed:9315851
source Swiss-Prot : SWS_FT_FI1

62) chain B
residue 988
type ACT_SITE
sequence E
description For poly [ADP-ribose] polymerase activity => ECO:0000305|PubMed:32028527, ECO:0000305|PubMed:7852410, ECO:0000305|PubMed:9315851
source Swiss-Prot : SWS_FT_FI1

63) chain A
residue 862
type BINDING
sequence H
description BINDING => ECO:0000250|UniProtKB:Q9UGN5
source Swiss-Prot : SWS_FT_FI2

64) chain A
residue 871
type BINDING
sequence G
description BINDING => ECO:0000250|UniProtKB:Q9UGN5
source Swiss-Prot : SWS_FT_FI2

65) chain A
residue 878
type BINDING
sequence R
description BINDING => ECO:0000250|UniProtKB:Q9UGN5
source Swiss-Prot : SWS_FT_FI2

66) chain A
residue 904
type BINDING
sequence S
description BINDING => ECO:0000250|UniProtKB:Q9UGN5
source Swiss-Prot : SWS_FT_FI2

67) chain B
residue 862
type BINDING
sequence H
description BINDING => ECO:0000250|UniProtKB:Q9UGN5
source Swiss-Prot : SWS_FT_FI2

68) chain B
residue 871
type BINDING
sequence G
description BINDING => ECO:0000250|UniProtKB:Q9UGN5
source Swiss-Prot : SWS_FT_FI2

69) chain B
residue 878
type BINDING
sequence R
description BINDING => ECO:0000250|UniProtKB:Q9UGN5
source Swiss-Prot : SWS_FT_FI2

70) chain B
residue 904
type BINDING
sequence S
description BINDING => ECO:0000250|UniProtKB:Q9UGN5
source Swiss-Prot : SWS_FT_FI2

71) chain A
residue 782
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:18669648, ECO:0007744|PubMed:19690332, ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:21406692, ECO:0007744|PubMed:23186163
source Swiss-Prot : SWS_FT_FI3

72) chain B
residue 782
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:18669648, ECO:0007744|PubMed:19690332, ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:21406692, ECO:0007744|PubMed:23186163
source Swiss-Prot : SWS_FT_FI3

73) chain A
residue 786
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:23186163
source Swiss-Prot : SWS_FT_FI4

74) chain B
residue 786
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:23186163
source Swiss-Prot : SWS_FT_FI4

75) chain A
residue 748
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate => ECO:0007744|PubMed:25218447, ECO:0007744|PubMed:28112733
source Swiss-Prot : SWS_FT_FI5

76) chain B
residue 748
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate => ECO:0007744|PubMed:25218447, ECO:0007744|PubMed:28112733
source Swiss-Prot : SWS_FT_FI5


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