eF-site ID 6ggb-B
PDB Code 6ggb
Chain B

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Title p53 cancer mutant Y220C in complex with small-molecule stabilizer PK9318
Classification DNA BINDING PROTEIN
Compound Cellular tumor antigen p53
Source (P53_HUMAN)
Sequence B:  SSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKL
FCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVV
RRCPHHERCSDSDGLAPPQHLIRVEGNLRAEYLDDRNTFR
HSVVVPCEPPEVGSDCTTIHYNYMCYSSCMGGMNRRPILT
IITLEDSSGNLLGRDSFEVRVCACPGRDRRTEEENLRK
Description


Functional site

1) chain B
residue 176
type
sequence C
description binding site for residue ZN B 401
source : AC4

2) chain B
residue 179
type
sequence H
description binding site for residue ZN B 401
source : AC4

3) chain B
residue 238
type
sequence C
description binding site for residue ZN B 401
source : AC4

4) chain B
residue 242
type
sequence C
description binding site for residue ZN B 401
source : AC4

5) chain B
residue 174
type
sequence R
description binding site for residue GOL B 402
source : AC5

6) chain B
residue 192
type
sequence Q
description binding site for residue GOL B 402
source : AC5

7) chain B
residue 207
type
sequence D
description binding site for residue GOL B 402
source : AC5

8) chain B
residue 212
type
sequence F
description binding site for residue GOL B 402
source : AC5

9) chain B
residue 214
type
sequence H
description binding site for residue GOL B 402
source : AC5

10) chain B
residue 138
type
sequence A
description binding site for residue EPE B 403
source : AC6

11) chain B
residue 139
type
sequence K
description binding site for residue EPE B 403
source : AC6

12) chain B
residue 140
type
sequence T
description binding site for residue EPE B 403
source : AC6

13) chain B
residue 198
type
sequence E
description binding site for residue EPE B 403
source : AC6

14) chain B
residue 235
type
sequence N
description binding site for residue EPE B 403
source : AC6

15) chain B
residue 145
type
sequence L
description binding site for residue EXQ B 404
source : AC7

16) chain B
residue 147
type
sequence V
description binding site for residue EXQ B 404
source : AC7

17) chain B
residue 151
type
sequence P
description binding site for residue EXQ B 404
source : AC7

18) chain B
residue 220
type
sequence C
description binding site for residue EXQ B 404
source : AC7

19) chain B
residue 221
type
sequence E
description binding site for residue EXQ B 404
source : AC7

20) chain B
residue 222
type
sequence P
description binding site for residue EXQ B 404
source : AC7

21) chain B
residue 223
type
sequence P
description binding site for residue EXQ B 404
source : AC7

22) chain B
residue 228
type
sequence D
description binding site for residue EXQ B 404
source : AC7

23) chain B
residue 230
type
sequence T
description binding site for residue EXQ B 404
source : AC7

24) chain B
residue 284
type MOD_RES
sequence T
description Phosphothreonine; by AURKB => ECO:0000269|PubMed:20959462
source Swiss-Prot : SWS_FT_FI6

25) chain B
residue 291
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:19536131
source Swiss-Prot : SWS_FT_FI8

26) chain B
residue 120
type SITE
sequence K
description Interaction with DNA => ECO:0000269|PubMed:16793544, ECO:0000269|PubMed:18996393, ECO:0000269|PubMed:20364130
source Swiss-Prot : SWS_FT_FI3

27) chain B
residue 120
type MOD_RES
sequence K
description N6-acetyllysine; by KAT6A => ECO:0000269|PubMed:23431171
source Swiss-Prot : SWS_FT_FI4

28) chain B
residue 183
type MOD_RES
sequence S
description Phosphoserine; by AURKB => ECO:0000269|PubMed:20959462
source Swiss-Prot : SWS_FT_FI5

29) chain B
residue 269
type MOD_RES
sequence S
description Phosphoserine; by AURKB => ECO:0000269|PubMed:20959462
source Swiss-Prot : SWS_FT_FI5

30) chain B
residue 176
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:14534297, ECO:0000269|PubMed:16793544, ECO:0000269|PubMed:17015838, ECO:0000269|PubMed:18650397, ECO:0000269|PubMed:19515728, ECO:0000269|PubMed:20142040, ECO:0000269|PubMed:20364130
source Swiss-Prot : SWS_FT_FI2

31) chain B
residue 179
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:14534297, ECO:0000269|PubMed:16793544, ECO:0000269|PubMed:17015838, ECO:0000269|PubMed:18650397, ECO:0000269|PubMed:19515728, ECO:0000269|PubMed:20142040, ECO:0000269|PubMed:20364130
source Swiss-Prot : SWS_FT_FI2

32) chain B
residue 238
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:14534297, ECO:0000269|PubMed:16793544, ECO:0000269|PubMed:17015838, ECO:0000269|PubMed:18650397, ECO:0000269|PubMed:19515728, ECO:0000269|PubMed:20142040, ECO:0000269|PubMed:20364130
source Swiss-Prot : SWS_FT_FI2

33) chain B
residue 242
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:14534297, ECO:0000269|PubMed:16793544, ECO:0000269|PubMed:17015838, ECO:0000269|PubMed:18650397, ECO:0000269|PubMed:19515728, ECO:0000269|PubMed:20142040, ECO:0000269|PubMed:20364130
source Swiss-Prot : SWS_FT_FI2


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