eF-site ID 6gfr-AB
PDB Code 6gfr
Chain A, B

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Title cyanobacterial GAPDH with NAD
Classification PHOTOSYNTHESIS
Compound Glyceraldehyde-3-phosphate dehydrogenase
Source (Q8DIW5_THEEB)
Sequence A:  SMVRVAINGFGRIGRNFMRCWLQRKANSKLEIVGINDTSD
PRTNAHLLKYDSMLGIFQDAEITADDDCIYAGGHAVKCVS
DRNPENLPWSAWGIDLVIEATGVFTSREGASKHLSAGAKK
VLITAPGKGNIPTYVVGVNHHTYDPSEDIVSNASCTTNCL
APIVKVLHEAFGIQQGMMTTTHSYTGDQRLLDASHRDLRR
ARAAAMNIVPTSTGAAKAVGLVIPELQGKLNGIALRVPTP
NVSVVDFVAQVEKPTIAEQVNQVIKEASETTMKGIIHYSE
LELVSSDYRGHNASSILDASLTMVLGGNLVKVVAWYDNEW
GYSQRVLDLAEHMAAHWA
B:  SMVRVAINGFGRIGRNFMRCWLQRKANSKLEIVGINDTSD
PRTNAHLLKYDSMLGIFQDAEITADDDCIYAGGHAVKCVS
DRNPENLPWSAWGIDLVIEATGVFTSREGASKHLSAGAKK
VLITAPGKGNIPTYVVGVNHHTYDPSEDIVSNASCTTNCL
APIVKVLHEAFGIQQGMMTTTHSYTGDQRLLDASHRDLRR
ARAAAMNIVPTSTGAAKAVGLVIPELQGKLNGIALRVPTP
NVSVVDFVAQVEKPTIAEQVNQVIKEASETTMKGIIHYSE
LELVSSDYRGHNASSILDASLTMVLGGNLVKVVAWYDNEW
GYSQRVLDLAEHMAAHWA
Description


Functional site

1) chain A
residue 8
type
sequence G
description binding site for residue NAD A 1001
source : AC1

2) chain A
residue 9
type
sequence F
description binding site for residue NAD A 1001
source : AC1

3) chain A
residue 10
type
sequence G
description binding site for residue NAD A 1001
source : AC1

4) chain A
residue 11
type
sequence R
description binding site for residue NAD A 1001
source : AC1

5) chain A
residue 12
type
sequence I
description binding site for residue NAD A 1001
source : AC1

6) chain A
residue 35
type
sequence N
description binding site for residue NAD A 1001
source : AC1

7) chain A
residue 36
type
sequence D
description binding site for residue NAD A 1001
source : AC1

8) chain A
residue 37
type
sequence T
description binding site for residue NAD A 1001
source : AC1

9) chain A
residue 81
type
sequence R
description binding site for residue NAD A 1001
source : AC1

10) chain A
residue 99
type
sequence A
description binding site for residue NAD A 1001
source : AC1

11) chain A
residue 100
type
sequence T
description binding site for residue NAD A 1001
source : AC1

12) chain A
residue 101
type
sequence G
description binding site for residue NAD A 1001
source : AC1

13) chain A
residue 123
type
sequence T
description binding site for residue NAD A 1001
source : AC1

14) chain A
residue 124
type
sequence A
description binding site for residue NAD A 1001
source : AC1

15) chain A
residue 317
type
sequence N
description binding site for residue NAD A 1001
source : AC1

16) chain A
residue 321
type
sequence Y
description binding site for residue NAD A 1001
source : AC1

17) chain A
residue 153
type
sequence S
description binding site for residue ACT A 1002
source : AC2

18) chain A
residue 155
type
sequence T
description binding site for residue ACT A 1002
source : AC2

19) chain A
residue 212
type
sequence T
description binding site for residue ACT A 1002
source : AC2

20) chain A
residue 213
type
sequence G
description binding site for residue ACT A 1002
source : AC2

21) chain A
residue 235
type
sequence R
description binding site for residue ACT A 1002
source : AC2

22) chain A
residue 305
type
sequence G
description binding site for residue MG A 1003
source : AC3

23) chain A
residue 307
type
sequence N
description binding site for residue MG A 1003
source : AC3

24) chain B
residue 8
type
sequence G
description binding site for residue NAD B 1001
source : AC4

25) chain B
residue 9
type
sequence F
description binding site for residue NAD B 1001
source : AC4

26) chain B
residue 10
type
sequence G
description binding site for residue NAD B 1001
source : AC4

27) chain B
residue 11
type
sequence R
description binding site for residue NAD B 1001
source : AC4

28) chain B
residue 12
type
sequence I
description binding site for residue NAD B 1001
source : AC4

29) chain B
residue 35
type
sequence N
description binding site for residue NAD B 1001
source : AC4

30) chain B
residue 36
type
sequence D
description binding site for residue NAD B 1001
source : AC4

31) chain B
residue 37
type
sequence T
description binding site for residue NAD B 1001
source : AC4

32) chain B
residue 81
type
sequence R
description binding site for residue NAD B 1001
source : AC4

33) chain B
residue 99
type
sequence A
description binding site for residue NAD B 1001
source : AC4

34) chain B
residue 100
type
sequence T
description binding site for residue NAD B 1001
source : AC4

35) chain B
residue 101
type
sequence G
description binding site for residue NAD B 1001
source : AC4

36) chain B
residue 103
type
sequence F
description binding site for residue NAD B 1001
source : AC4

37) chain B
residue 123
type
sequence T
description binding site for residue NAD B 1001
source : AC4

38) chain B
residue 124
type
sequence A
description binding site for residue NAD B 1001
source : AC4

39) chain B
residue 317
type
sequence N
description binding site for residue NAD B 1001
source : AC4

40) chain B
residue 321
type
sequence Y
description binding site for residue NAD B 1001
source : AC4

41) chain B
residue 153
type
sequence S
description binding site for residue ACT B 1002
source : AC5

42) chain B
residue 155
type
sequence T
description binding site for residue ACT B 1002
source : AC5

43) chain B
residue 212
type
sequence T
description binding site for residue ACT B 1002
source : AC5

44) chain B
residue 213
type
sequence G
description binding site for residue ACT B 1002
source : AC5

45) chain B
residue 184
type
sequence T
description binding site for residue ACT B 1003
source : AC6

46) chain B
residue 186
type
sequence D
description binding site for residue ACT B 1003
source : AC6

47) chain A
residue 152-159
type prosite
sequence ASCTTNCL
description GAPDH Glyceraldehyde 3-phosphate dehydrogenase active site. ASCTTNcL
source prosite : PS00071


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