|
eF-site ID
|
6gcs-I |
PDB Code
|
6gcs |
Chain
|
I |
|
click to enlarge
|
|
Title
|
Cryo-EM structure of respiratory complex I from Yarrowia lipolytica |
Classification
|
OXIDOREDUCTASE |
Compound
|
75-KDA PROTEIN (NUAM) |
Source
|
ORGANISM_SCIENTIFIC: Yarrowia lipolytica; |
|
Sequence
|
I: |
APPAGFRIHRPATWEESEEGALSKATKYFLLAEMFRGLYV
VLEQFFRAPYTIYYPFEKGPVSPRFRGEHALRRYPSGEER
CIACKLCEAICPALAITIDAEERIDGSRRTTKYDIDMTKC
IYCGYCQESCPVDAIVETPNVEYATETREELLYNKEKLLA
NGDKWELELQYALDADAPYR
|
|
Description
|
(1) |
NUAM protein (E.C.1.6.99.3), NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (E.C.1.6.5.3,1.6.99.3), NUCM protein (E.C.1.6.99.3), NADH:ubiquinone reductase (H(+)-translocating), YALI0D24585p, YALI0E23089p, NUGM protein (E.C.1.6.99.3), Subunit NUHM of protein NADH:Ubiquinone Oxidoreductase (Complex I) (E.C.1.6.99.3), Subunit NUIM of protein NADH:Ubiquinone Oxidoreductase (Complex I) (E.C.1.6.99.3), YALI0E11891p, Subunit NUKM of protein NADH:Ubiquinone Oxidoreductase (Complex I) (E.C.1.6.99.3), NADH-ubiquinone oxidoreductase chain 4L (E.C.1.6.5.3), Acyl carrier protein, NADH-ubiquinone oxidoreductase, YALI0D10274p, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit N7BM, NUVM protein (E.C.1.6.99.3), NADH-ubiquinone oxidoreductase chain 1 (E.C.1.6.5.3), NADH-ubiquinone oxidoreductase chain 2 (E.C.1.6.5.3), NADH-ubiquinone oxidoreductase chain 3 (E.C.1.6.5.3), NADH-ubiquinone oxidoreductase chain 4 (E.C.1.6.5.3), NADH-ubiquinone oxidoreductase chain 5 (E.C.1.6.5.3), NADH-ubiquinone oxidoreductase chain 6 (E.C.1.6.5.3)
|
|
Functional site
|
|
1)
|
chain |
I |
residue |
118 |
type |
|
sequence |
H
|
description |
binding site for residue SF4 I 301
|
source |
: AC8
|
|
2)
|
chain |
I |
residue |
140 |
type |
|
sequence |
C
|
description |
binding site for residue SF4 I 301
|
source |
: AC8
|
|
3)
|
chain |
I |
residue |
141 |
type |
|
sequence |
P
|
description |
binding site for residue SF4 I 301
|
source |
: AC8
|
|
4)
|
chain |
I |
residue |
145 |
type |
|
sequence |
I
|
description |
binding site for residue SF4 I 301
|
source |
: AC8
|
|
5)
|
chain |
I |
residue |
169 |
type |
|
sequence |
C
|
description |
binding site for residue SF4 I 301
|
source |
: AC8
|
|
6)
|
chain |
I |
residue |
170 |
type |
|
sequence |
I
|
description |
binding site for residue SF4 I 301
|
source |
: AC8
|
|
7)
|
chain |
I |
residue |
172 |
type |
|
sequence |
C
|
description |
binding site for residue SF4 I 301
|
source |
: AC8
|
|
8)
|
chain |
I |
residue |
173 |
type |
|
sequence |
G
|
description |
binding site for residue SF4 I 301
|
source |
: AC8
|
|
9)
|
chain |
I |
residue |
174 |
type |
|
sequence |
Y
|
description |
binding site for residue SF4 I 301
|
source |
: AC8
|
|
10)
|
chain |
I |
residue |
175 |
type |
|
sequence |
C
|
description |
binding site for residue SF4 I 301
|
source |
: AC8
|
|
11)
|
chain |
I |
residue |
186 |
type |
|
sequence |
E
|
description |
binding site for residue SF4 I 301
|
source |
: AC8
|
|
12)
|
chain |
I |
residue |
130 |
type |
|
sequence |
C
|
description |
binding site for residue SF4 I 302
|
source |
: AC9
|
|
13)
|
chain |
I |
residue |
131 |
type |
|
sequence |
I
|
description |
binding site for residue SF4 I 302
|
source |
: AC9
|
|
14)
|
chain |
I |
residue |
132 |
type |
|
sequence |
A
|
description |
binding site for residue SF4 I 302
|
source |
: AC9
|
|
15)
|
chain |
I |
residue |
133 |
type |
|
sequence |
C
|
description |
binding site for residue SF4 I 302
|
source |
: AC9
|
|
16)
|
chain |
I |
residue |
134 |
type |
|
sequence |
K
|
description |
binding site for residue SF4 I 302
|
source |
: AC9
|
|
17)
|
chain |
I |
residue |
136 |
type |
|
sequence |
C
|
description |
binding site for residue SF4 I 302
|
source |
: AC9
|
|
18)
|
chain |
I |
residue |
147 |
type |
|
sequence |
I
|
description |
binding site for residue SF4 I 302
|
source |
: AC9
|
|
19)
|
chain |
I |
residue |
162 |
type |
|
sequence |
Y
|
description |
binding site for residue SF4 I 302
|
source |
: AC9
|
|
20)
|
chain |
I |
residue |
179 |
type |
|
sequence |
C
|
description |
binding site for residue SF4 I 302
|
source |
: AC9
|
|
21)
|
chain |
I |
residue |
77 |
type |
|
sequence |
Y
|
description |
binding site for residue 3PE 1 401
|
source |
: AD6
|
|
22)
|
chain |
I |
residue |
78 |
type |
|
sequence |
F
|
description |
binding site for residue 3PE 1 401
|
source |
: AD6
|
|
23)
|
chain |
I |
residue |
80 |
type |
|
sequence |
L
|
description |
binding site for residue 3PE 1 401
|
source |
: AD6
|
|
24)
|
chain |
I |
residue |
83 |
type |
|
sequence |
M
|
description |
binding site for residue 3PE 1 401
|
source |
: AD6
|
|
25)
|
chain |
I |
residue |
130-141 |
type |
prosite |
sequence |
CIACKLCEAICP
|
description |
4FE4S_FER_1 4Fe-4S ferredoxin-type iron-sulfur binding region signature. CiACKlCEaICP
|
source |
prosite : PS00198
|
|
26)
|
chain |
I |
residue |
169-180 |
type |
prosite |
sequence |
CIYCGYCQESCP
|
description |
4FE4S_FER_1 4Fe-4S ferredoxin-type iron-sulfur binding region signature. CiACKlCEaICP
|
source |
prosite : PS00198
|
|
|
|