eF-site ID 6gcs-I
PDB Code 6gcs
Chain I

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Title Cryo-EM structure of respiratory complex I from Yarrowia lipolytica
Classification OXIDOREDUCTASE
Compound 75-KDA PROTEIN (NUAM)
Source ORGANISM_SCIENTIFIC: Yarrowia lipolytica;
Sequence I:  APPAGFRIHRPATWEESEEGALSKATKYFLLAEMFRGLYV
VLEQFFRAPYTIYYPFEKGPVSPRFRGEHALRRYPSGEER
CIACKLCEAICPALAITIDAEERIDGSRRTTKYDIDMTKC
IYCGYCQESCPVDAIVETPNVEYATETREELLYNKEKLLA
NGDKWELELQYALDADAPYR
Description (1)  NUAM protein (E.C.1.6.99.3), NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (E.C.1.6.5.3,1.6.99.3), NUCM protein (E.C.1.6.99.3), NADH:ubiquinone reductase (H(+)-translocating), YALI0D24585p, YALI0E23089p, NUGM protein (E.C.1.6.99.3), Subunit NUHM of protein NADH:Ubiquinone Oxidoreductase (Complex I) (E.C.1.6.99.3), Subunit NUIM of protein NADH:Ubiquinone Oxidoreductase (Complex I) (E.C.1.6.99.3), YALI0E11891p, Subunit NUKM of protein NADH:Ubiquinone Oxidoreductase (Complex I) (E.C.1.6.99.3), NADH-ubiquinone oxidoreductase chain 4L (E.C.1.6.5.3), Acyl carrier protein, NADH-ubiquinone oxidoreductase, YALI0D10274p, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit N7BM, NUVM protein (E.C.1.6.99.3), NADH-ubiquinone oxidoreductase chain 1 (E.C.1.6.5.3), NADH-ubiquinone oxidoreductase chain 2 (E.C.1.6.5.3), NADH-ubiquinone oxidoreductase chain 3 (E.C.1.6.5.3), NADH-ubiquinone oxidoreductase chain 4 (E.C.1.6.5.3), NADH-ubiquinone oxidoreductase chain 5 (E.C.1.6.5.3), NADH-ubiquinone oxidoreductase chain 6 (E.C.1.6.5.3)


Functional site

1) chain I
residue 118
type
sequence H
description binding site for residue SF4 I 301
source : AC8

2) chain I
residue 140
type
sequence C
description binding site for residue SF4 I 301
source : AC8

3) chain I
residue 141
type
sequence P
description binding site for residue SF4 I 301
source : AC8

4) chain I
residue 145
type
sequence I
description binding site for residue SF4 I 301
source : AC8

5) chain I
residue 169
type
sequence C
description binding site for residue SF4 I 301
source : AC8

6) chain I
residue 170
type
sequence I
description binding site for residue SF4 I 301
source : AC8

7) chain I
residue 172
type
sequence C
description binding site for residue SF4 I 301
source : AC8

8) chain I
residue 173
type
sequence G
description binding site for residue SF4 I 301
source : AC8

9) chain I
residue 174
type
sequence Y
description binding site for residue SF4 I 301
source : AC8

10) chain I
residue 175
type
sequence C
description binding site for residue SF4 I 301
source : AC8

11) chain I
residue 186
type
sequence E
description binding site for residue SF4 I 301
source : AC8

12) chain I
residue 130
type
sequence C
description binding site for residue SF4 I 302
source : AC9

13) chain I
residue 131
type
sequence I
description binding site for residue SF4 I 302
source : AC9

14) chain I
residue 132
type
sequence A
description binding site for residue SF4 I 302
source : AC9

15) chain I
residue 133
type
sequence C
description binding site for residue SF4 I 302
source : AC9

16) chain I
residue 134
type
sequence K
description binding site for residue SF4 I 302
source : AC9

17) chain I
residue 136
type
sequence C
description binding site for residue SF4 I 302
source : AC9

18) chain I
residue 147
type
sequence I
description binding site for residue SF4 I 302
source : AC9

19) chain I
residue 162
type
sequence Y
description binding site for residue SF4 I 302
source : AC9

20) chain I
residue 179
type
sequence C
description binding site for residue SF4 I 302
source : AC9

21) chain I
residue 77
type
sequence Y
description binding site for residue 3PE 1 401
source : AD6

22) chain I
residue 78
type
sequence F
description binding site for residue 3PE 1 401
source : AD6

23) chain I
residue 80
type
sequence L
description binding site for residue 3PE 1 401
source : AD6

24) chain I
residue 83
type
sequence M
description binding site for residue 3PE 1 401
source : AD6

25) chain I
residue 130-141
type prosite
sequence CIACKLCEAICP
description 4FE4S_FER_1 4Fe-4S ferredoxin-type iron-sulfur binding region signature. CiACKlCEaICP
source prosite : PS00198

26) chain I
residue 169-180
type prosite
sequence CIYCGYCQESCP
description 4FE4S_FER_1 4Fe-4S ferredoxin-type iron-sulfur binding region signature. CiACKlCEaICP
source prosite : PS00198


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