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eF-site ID
|
6gcs-1 |
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PDB Code
|
6gcs |
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Chain
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1 |
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click to enlarge
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Title
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Cryo-EM structure of respiratory complex I from Yarrowia lipolytica |
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Classification
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OXIDOREDUCTASE |
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Compound
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75-KDA PROTEIN (NUAM) |
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Source
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ORGANISM_SCIENTIFIC: Yarrowia lipolytica; |
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Sequence
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1: |
MIINIVEILIFLVCVLFSVAYLTVAERKTLAYMQRRLGPN
FVGYYGLLQAFADAVKLLLKEIVLPKESNYIILVISPLIT
LITALIGWVVIPLGPGITLGELNLGILFSLAIGSLGVFGS
LLSGWSSNSKYSLLGSIRSTAQLISYELILTSIFIIIIMF
VSSLNITTIIETQRVVWYCIPLLPLLLIFFIASVAETARP
PFDLTESESELVAGYFTEYSGSPFVFFFLAEYSNIILISA
FNGYLLLGGYLSFNYSYLFNILFNDYSYVSFLFEGLINSS
AYAIKLVFLMFSFIWVRAAFPRFTYDNLINFCWIILLPLL
FGIFLIIPSTLYIFDSFPTL
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Description
|
(1) |
NUAM protein (E.C.1.6.99.3), NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (E.C.1.6.5.3,1.6.99.3), NUCM protein (E.C.1.6.99.3), NADH:ubiquinone reductase (H(+)-translocating), YALI0D24585p, YALI0E23089p, NUGM protein (E.C.1.6.99.3), Subunit NUHM of protein NADH:Ubiquinone Oxidoreductase (Complex I) (E.C.1.6.99.3), Subunit NUIM of protein NADH:Ubiquinone Oxidoreductase (Complex I) (E.C.1.6.99.3), YALI0E11891p, Subunit NUKM of protein NADH:Ubiquinone Oxidoreductase (Complex I) (E.C.1.6.99.3), NADH-ubiquinone oxidoreductase chain 4L (E.C.1.6.5.3), Acyl carrier protein, NADH-ubiquinone oxidoreductase, YALI0D10274p, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit N7BM, NUVM protein (E.C.1.6.99.3), NADH-ubiquinone oxidoreductase chain 1 (E.C.1.6.5.3), NADH-ubiquinone oxidoreductase chain 2 (E.C.1.6.5.3), NADH-ubiquinone oxidoreductase chain 3 (E.C.1.6.5.3), NADH-ubiquinone oxidoreductase chain 4 (E.C.1.6.5.3), NADH-ubiquinone oxidoreductase chain 5 (E.C.1.6.5.3), NADH-ubiquinone oxidoreductase chain 6 (E.C.1.6.5.3)
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Functional site
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|
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1)
|
chain |
1 |
| residue |
184 |
| type |
|
| sequence |
P
|
| description |
binding site for residue 3PE 1 401
|
| source |
: AD6
|
|
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2)
|
chain |
1 |
| residue |
185 |
| type |
|
| sequence |
L
|
| description |
binding site for residue 3PE 1 401
|
| source |
: AD6
|
|
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3)
|
chain |
1 |
| residue |
188 |
| type |
|
| sequence |
I
|
| description |
binding site for residue 3PE 1 401
|
| source |
: AD6
|
|
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4)
|
chain |
1 |
| residue |
190 |
| type |
|
| sequence |
F
|
| description |
binding site for residue 3PE 1 401
|
| source |
: AD6
|
|
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5)
|
chain |
1 |
| residue |
191 |
| type |
|
| sequence |
I
|
| description |
binding site for residue 3PE 1 401
|
| source |
: AD6
|
|
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6)
|
chain |
1 |
| residue |
303 |
| type |
|
| sequence |
F
|
| description |
binding site for residue 3PE 1 401
|
| source |
: AD6
|
|
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7)
|
chain |
1 |
| residue |
310 |
| type |
|
| sequence |
N
|
| description |
binding site for residue 3PE 1 401
|
| source |
: AD6
|
|
|
8)
|
chain |
1 |
| residue |
311 |
| type |
|
| sequence |
F
|
| description |
binding site for residue 3PE 1 401
|
| source |
: AD6
|
|
|
9)
|
chain |
1 |
| residue |
323 |
| type |
|
| sequence |
I
|
| description |
binding site for residue 3PE 1 401
|
| source |
: AD6
|
|
|
10)
|
chain |
1 |
| residue |
46-61 |
| type |
prosite |
| sequence |
GLLQAFADAVKLLLKE
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| description |
COMPLEX1_ND1_1 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. GLLQaFaDAVKLLlKE
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| source |
prosite : PS00667
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|
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11)
|
chain |
1 |
| residue |
201-214 |
| type |
prosite |
| sequence |
PFDLTESESELVAG
|
| description |
COMPLEX1_ND1_2 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. PFDLTESEseLVa.G
|
| source |
prosite : PS00668
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