|
|
eF-site ID
|
6gcs-E |
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PDB Code
|
6gcs |
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Chain
|
E |
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click to enlarge
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Title
|
Cryo-EM structure of respiratory complex I from Yarrowia lipolytica |
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Classification
|
OXIDOREDUCTASE |
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Compound
|
75-KDA PROTEIN (NUAM) |
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Source
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ORGANISM_SCIENTIFIC: Yarrowia lipolytica; |
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Sequence
|
E: |
GKTLIAKGTGGRSSRTGYTATVFGANGFLGSYLTAKLAKH
GTTVVVPYREEMAKRHLKVTGDLGVVNFLEMDLRNLESID
EAVRHSDIVVNLIGREYETKNFNYYDVHVEGARRIAEAVK
KHNIARYIHVSAFNAEIDSPSEFNHTKGLGEQVTKDIVPW
ATIVRPAPMFGREDKWFLDRMARSPCLVSANKFQETSNPV
HVIDVAAALERICFDDSTVAQTFELYGPQKFTQKQIIDMV
SETLRKEVRHIELPKALYQAYTKATQAIWWPTYSPDQVER
QFLSQKIDPSAKTFNDLDLTPMELPDLMFKLIRPYRVN
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Description
|
(1) |
NUAM protein (E.C.1.6.99.3), NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (E.C.1.6.5.3,1.6.99.3), NUCM protein (E.C.1.6.99.3), NADH:ubiquinone reductase (H(+)-translocating), YALI0D24585p, YALI0E23089p, NUGM protein (E.C.1.6.99.3), Subunit NUHM of protein NADH:Ubiquinone Oxidoreductase (Complex I) (E.C.1.6.99.3), Subunit NUIM of protein NADH:Ubiquinone Oxidoreductase (Complex I) (E.C.1.6.99.3), YALI0E11891p, Subunit NUKM of protein NADH:Ubiquinone Oxidoreductase (Complex I) (E.C.1.6.99.3), NADH-ubiquinone oxidoreductase chain 4L (E.C.1.6.5.3), Acyl carrier protein, NADH-ubiquinone oxidoreductase, YALI0D10274p, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit N7BM, NUVM protein (E.C.1.6.99.3), NADH-ubiquinone oxidoreductase chain 1 (E.C.1.6.5.3), NADH-ubiquinone oxidoreductase chain 2 (E.C.1.6.5.3), NADH-ubiquinone oxidoreductase chain 3 (E.C.1.6.5.3), NADH-ubiquinone oxidoreductase chain 4 (E.C.1.6.5.3), NADH-ubiquinone oxidoreductase chain 5 (E.C.1.6.5.3), NADH-ubiquinone oxidoreductase chain 6 (E.C.1.6.5.3)
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Functional site
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|
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1)
|
chain |
E |
| residue |
60 |
| type |
|
| sequence |
G
|
| description |
binding site for residue NDP E 401
|
| source |
: AC6
|
|
|
2)
|
chain |
E |
| residue |
62 |
| type |
|
| sequence |
N
|
| description |
binding site for residue NDP E 401
|
| source |
: AC6
|
|
|
3)
|
chain |
E |
| residue |
63 |
| type |
|
| sequence |
G
|
| description |
binding site for residue NDP E 401
|
| source |
: AC6
|
|
|
4)
|
chain |
E |
| residue |
64 |
| type |
|
| sequence |
F
|
| description |
binding site for residue NDP E 401
|
| source |
: AC6
|
|
|
5)
|
chain |
E |
| residue |
65 |
| type |
|
| sequence |
L
|
| description |
binding site for residue NDP E 401
|
| source |
: AC6
|
|
|
6)
|
chain |
E |
| residue |
85 |
| type |
|
| sequence |
R
|
| description |
binding site for residue NDP E 401
|
| source |
: AC6
|
|
|
7)
|
chain |
E |
| residue |
109 |
| type |
|
| sequence |
L
|
| description |
binding site for residue NDP E 401
|
| source |
: AC6
|
|
|
8)
|
chain |
E |
| residue |
129 |
| type |
|
| sequence |
I
|
| description |
binding site for residue NDP E 401
|
| source |
: AC6
|
|
|
9)
|
chain |
E |
| residue |
130 |
| type |
|
| sequence |
G
|
| description |
binding site for residue NDP E 401
|
| source |
: AC6
|
|
|
10)
|
chain |
E |
| residue |
131 |
| type |
|
| sequence |
R
|
| description |
binding site for residue NDP E 401
|
| source |
: AC6
|
|
|
11)
|
chain |
E |
| residue |
132 |
| type |
|
| sequence |
E
|
| description |
binding site for residue NDP E 401
|
| source |
: AC6
|
|
|
12)
|
chain |
E |
| residue |
138 |
| type |
|
| sequence |
F
|
| description |
binding site for residue NDP E 401
|
| source |
: AC6
|
|
|
13)
|
chain |
E |
| residue |
169 |
| type |
|
| sequence |
F
|
| description |
binding site for residue NDP E 401
|
| source |
: AC6
|
|
|
14)
|
chain |
E |
| residue |
183 |
| type |
|
| sequence |
K
|
| description |
binding site for residue NDP E 401
|
| source |
: AC6
|
|
|
15)
|
chain |
E |
| residue |
202 |
| type |
|
| sequence |
P
|
| description |
binding site for residue NDP E 401
|
| source |
: AC6
|
|
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16)
|
chain |
E |
| residue |
203 |
| type |
|
| sequence |
A
|
| description |
binding site for residue NDP E 401
|
| source |
: AC6
|
|
|
17)
|
chain |
E |
| residue |
205 |
| type |
|
| sequence |
M
|
| description |
binding site for residue NDP E 401
|
| source |
: AC6
|
|
|
18)
|
chain |
E |
| residue |
211 |
| type |
|
| sequence |
K
|
| description |
binding site for residue NDP E 401
|
| source |
: AC6
|
|
|
|