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eF-site ID
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6gcs-5 |
PDB Code
|
6gcs |
Chain
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5 |
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click to enlarge
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Title
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Cryo-EM structure of respiratory complex I from Yarrowia lipolytica |
Classification
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OXIDOREDUCTASE |
Compound
|
75-KDA PROTEIN (NUAM) |
Source
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ORGANISM_SCIENTIFIC: Yarrowia lipolytica; |
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Sequence
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5: |
ISLIIILPCISWLFPLFFGRQLGYVFVTRMTSTLIIITTL
ITYYYFYQLLGNNNPINLELFNYLNIDYLDINYNFEIDAL
TITMLLAITTISSMVHIYSIGYMETDPHQVRFFSLLSMFT
FWMIILVTGSNYFVLFVGWEFIGVTSYLLISFWVTRLQAM
KSALSAVLMNRFGDAFFVLGLCVIAYVFGTLNYSTIFATA
YLINTDLLVLIMLALFIAAMAKSAQFGLHNWLTLAMEGPT
PVSSLLHAATLVTAGIYLLLRSANILEYTPTVLFIILWIG
ALTTLSAGLIAICSNDLKRIIALSTMSQLGMMTIAIGLSA
YNLALFHLLGHAFFKALLFMSAGSIIHSILNESQDIRTYG
GLLSYLPYTYICITIASLSLMAMPGLTGYYTKDIIIESTY
GSYSISNYVVYWIAYLSAVLTCVYSMKILYLTFYSNPNNN
TITYYNAHESNIYITLPMFILAIFAMFAGWILKDIGTHIL
PNNFSYFDTEFSITQFYKLLPLISAILVSILIVVLNEFFA
IVFNLNNKYINTVYSIFNQKLVSDQILNHFIIFKGLVTSG
NIAHHVDKGSLYRLGPVGINRLLNKASYNVINLSSNTRSS
LSMNSMLILITIVSLLLLVLVMNVNFIIVIPVLISILYI
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Description
|
(1) |
NUAM protein (E.C.1.6.99.3), NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (E.C.1.6.5.3,1.6.99.3), NUCM protein (E.C.1.6.99.3), NADH:ubiquinone reductase (H(+)-translocating), YALI0D24585p, YALI0E23089p, NUGM protein (E.C.1.6.99.3), Subunit NUHM of protein NADH:Ubiquinone Oxidoreductase (Complex I) (E.C.1.6.99.3), Subunit NUIM of protein NADH:Ubiquinone Oxidoreductase (Complex I) (E.C.1.6.99.3), YALI0E11891p, Subunit NUKM of protein NADH:Ubiquinone Oxidoreductase (Complex I) (E.C.1.6.99.3), NADH-ubiquinone oxidoreductase chain 4L (E.C.1.6.5.3), Acyl carrier protein, NADH-ubiquinone oxidoreductase, YALI0D10274p, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit N7BM, NUVM protein (E.C.1.6.99.3), NADH-ubiquinone oxidoreductase chain 1 (E.C.1.6.5.3), NADH-ubiquinone oxidoreductase chain 2 (E.C.1.6.5.3), NADH-ubiquinone oxidoreductase chain 3 (E.C.1.6.5.3), NADH-ubiquinone oxidoreductase chain 4 (E.C.1.6.5.3), NADH-ubiquinone oxidoreductase chain 5 (E.C.1.6.5.3), NADH-ubiquinone oxidoreductase chain 6 (E.C.1.6.5.3)
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Functional site
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1)
|
chain |
5 |
residue |
304-322 |
type |
TRANSMEM |
sequence |
IIALSTMSQLGMMTIAIGL
|
description |
Helical => ECO:0000255
|
source |
Swiss-Prot : SWS_FT_FI1
|
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2)
|
chain |
5 |
residue |
332-354 |
type |
TRANSMEM |
sequence |
LLGHAFFKALLFMSAGSIIHSIL
|
description |
Helical => ECO:0000255
|
source |
Swiss-Prot : SWS_FT_FI1
|
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3)
|
chain |
5 |
residue |
370-390 |
type |
TRANSMEM |
sequence |
LPYTYICITIASLSLMAMPGL
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description |
Helical => ECO:0000255
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source |
Swiss-Prot : SWS_FT_FI1
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4)
|
chain |
5 |
residue |
413-433 |
type |
TRANSMEM |
sequence |
VVYWIAYLSAVLTCVYSMKIL
|
description |
Helical => ECO:0000255
|
source |
Swiss-Prot : SWS_FT_FI1
|
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5)
|
chain |
5 |
residue |
456-476 |
type |
TRANSMEM |
sequence |
IYITLPMFILAIFAMFAGWIL
|
description |
Helical => ECO:0000255
|
source |
Swiss-Prot : SWS_FT_FI1
|
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6)
|
chain |
5 |
residue |
516-536 |
type |
TRANSMEM |
sequence |
ISAILVSILIVVLNEFFAIVF
|
description |
Helical => ECO:0000255
|
source |
Swiss-Prot : SWS_FT_FI1
|
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7)
|
chain |
5 |
residue |
629-649 |
type |
TRANSMEM |
sequence |
LLLVLVMNVNFIIVIPVLISI
|
description |
Helical => ECO:0000255
|
source |
Swiss-Prot : SWS_FT_FI1
|
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8)
|
chain |
5 |
residue |
180-200 |
type |
TRANSMEM |
sequence |
FFVLGLCVIAYVFGTLNYSTI
|
description |
Helical => ECO:0000255
|
source |
Swiss-Prot : SWS_FT_FI1
|
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9)
|
chain |
5 |
residue |
204-224 |
type |
TRANSMEM |
sequence |
AYLINTDLLVLIMLALFIAAM
|
description |
Helical => ECO:0000255
|
source |
Swiss-Prot : SWS_FT_FI1
|
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10)
|
chain |
5 |
residue |
244-264 |
type |
TRANSMEM |
sequence |
TPVSSLLHAATLVTAGIYLLL
|
description |
Helical => ECO:0000255
|
source |
Swiss-Prot : SWS_FT_FI1
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11)
|
chain |
5 |
residue |
276-296 |
type |
TRANSMEM |
sequence |
VLFIILWIGALTTLSAGLIAI
|
description |
Helical => ECO:0000255
|
source |
Swiss-Prot : SWS_FT_FI1
|
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