eF-site ID 6gcs-5
PDB Code 6gcs
Chain 5

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Title Cryo-EM structure of respiratory complex I from Yarrowia lipolytica
Classification OXIDOREDUCTASE
Compound 75-KDA PROTEIN (NUAM)
Source ORGANISM_SCIENTIFIC: Yarrowia lipolytica;
Sequence 5:  ISLIIILPCISWLFPLFFGRQLGYVFVTRMTSTLIIITTL
ITYYYFYQLLGNNNPINLELFNYLNIDYLDINYNFEIDAL
TITMLLAITTISSMVHIYSIGYMETDPHQVRFFSLLSMFT
FWMIILVTGSNYFVLFVGWEFIGVTSYLLISFWVTRLQAM
KSALSAVLMNRFGDAFFVLGLCVIAYVFGTLNYSTIFATA
YLINTDLLVLIMLALFIAAMAKSAQFGLHNWLTLAMEGPT
PVSSLLHAATLVTAGIYLLLRSANILEYTPTVLFIILWIG
ALTTLSAGLIAICSNDLKRIIALSTMSQLGMMTIAIGLSA
YNLALFHLLGHAFFKALLFMSAGSIIHSILNESQDIRTYG
GLLSYLPYTYICITIASLSLMAMPGLTGYYTKDIIIESTY
GSYSISNYVVYWIAYLSAVLTCVYSMKILYLTFYSNPNNN
TITYYNAHESNIYITLPMFILAIFAMFAGWILKDIGTHIL
PNNFSYFDTEFSITQFYKLLPLISAILVSILIVVLNEFFA
IVFNLNNKYINTVYSIFNQKLVSDQILNHFIIFKGLVTSG
NIAHHVDKGSLYRLGPVGINRLLNKASYNVINLSSNTRSS
LSMNSMLILITIVSLLLLVLVMNVNFIIVIPVLISILYI
Description (1)  NUAM protein (E.C.1.6.99.3), NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (E.C.1.6.5.3,1.6.99.3), NUCM protein (E.C.1.6.99.3), NADH:ubiquinone reductase (H(+)-translocating), YALI0D24585p, YALI0E23089p, NUGM protein (E.C.1.6.99.3), Subunit NUHM of protein NADH:Ubiquinone Oxidoreductase (Complex I) (E.C.1.6.99.3), Subunit NUIM of protein NADH:Ubiquinone Oxidoreductase (Complex I) (E.C.1.6.99.3), YALI0E11891p, Subunit NUKM of protein NADH:Ubiquinone Oxidoreductase (Complex I) (E.C.1.6.99.3), NADH-ubiquinone oxidoreductase chain 4L (E.C.1.6.5.3), Acyl carrier protein, NADH-ubiquinone oxidoreductase, YALI0D10274p, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit N7BM, NUVM protein (E.C.1.6.99.3), NADH-ubiquinone oxidoreductase chain 1 (E.C.1.6.5.3), NADH-ubiquinone oxidoreductase chain 2 (E.C.1.6.5.3), NADH-ubiquinone oxidoreductase chain 3 (E.C.1.6.5.3), NADH-ubiquinone oxidoreductase chain 4 (E.C.1.6.5.3), NADH-ubiquinone oxidoreductase chain 5 (E.C.1.6.5.3), NADH-ubiquinone oxidoreductase chain 6 (E.C.1.6.5.3)


Functional site

1) chain 5
residue 304-322
type TRANSMEM
sequence IIALSTMSQLGMMTIAIGL
description Helical => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

2) chain 5
residue 332-354
type TRANSMEM
sequence LLGHAFFKALLFMSAGSIIHSIL
description Helical => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

3) chain 5
residue 370-390
type TRANSMEM
sequence LPYTYICITIASLSLMAMPGL
description Helical => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

4) chain 5
residue 413-433
type TRANSMEM
sequence VVYWIAYLSAVLTCVYSMKIL
description Helical => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

5) chain 5
residue 456-476
type TRANSMEM
sequence IYITLPMFILAIFAMFAGWIL
description Helical => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

6) chain 5
residue 516-536
type TRANSMEM
sequence ISAILVSILIVVLNEFFAIVF
description Helical => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

7) chain 5
residue 629-649
type TRANSMEM
sequence LLLVLVMNVNFIIVIPVLISI
description Helical => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

8) chain 5
residue 180-200
type TRANSMEM
sequence FFVLGLCVIAYVFGTLNYSTI
description Helical => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

9) chain 5
residue 204-224
type TRANSMEM
sequence AYLINTDLLVLIMLALFIAAM
description Helical => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

10) chain 5
residue 244-264
type TRANSMEM
sequence TPVSSLLHAATLVTAGIYLLL
description Helical => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

11) chain 5
residue 276-296
type TRANSMEM
sequence VLFIILWIGALTTLSAGLIAI
description Helical => ECO:0000255
source Swiss-Prot : SWS_FT_FI1


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